Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004666A_C01 KMC004666A_c01
(576 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB02006.1| epoxide hydrolase [Nicotiana tabacum] 114 7e-25
gb|AAL58266.1|AC068923_8 putative epoxide hydrolase [Oryza sativ... 94 2e-18
gb|AAL58275.1|AC068923_17 putative epoxide hydrolase [Oryza sati... 91 1e-17
gb|AAL58278.1|AC068923_20 putative epoxide hydrolase [Oryza sati... 90 2e-17
gb|AAL58264.1|AC068923_6 putative epoxide hydrolase [Oryza sativ... 88 7e-17
>gb|AAB02006.1| epoxide hydrolase [Nicotiana tabacum]
Length = 311
Score = 114 bits (286), Expect = 7e-25
Identities = 54/87 (62%), Positives = 67/87 (76%)
Frame = -2
Query: 575 TALQVPYRSLGEDFNLSDPVVKVPALVITGGKDYSLKFPGIGDLIKGEKAKEFVPNLETA 396
TALQVPYR+ E++ + D VKVP L++ G KDY+LKF G+ +K KE+VPNLET
Sbjct: 223 TALQVPYRAWLEEYGVKDIKVKVPCLLVMGEKDYALKFGGLEQYVKSGMVKEYVPNLETI 282
Query: 395 FIPEGTHFVQEQFPEQVNQLILAFLAK 315
F+PEG+HFVQEQFPEQVNQLI+ FL K
Sbjct: 283 FLPEGSHFVQEQFPEQVNQLIITFLKK 309
>gb|AAL58266.1|AC068923_8 putative epoxide hydrolase [Oryza sativa (japonica cultivar-group)]
Length = 311
Score = 93.6 bits (231), Expect = 2e-18
Identities = 42/88 (47%), Positives = 60/88 (67%)
Frame = -2
Query: 575 TALQVPYRSLGEDFNLSDPVVKVPALVITGGKDYSLKFPGIGDLIKGEKAKEFVPNLETA 396
TA+Q+PYR+ ++P ++P VI G KDY LKFP + + + EK KE P+
Sbjct: 223 TAIQIPYRTKAAKAEGANPRFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIAPDYGIT 282
Query: 395 FIPEGTHFVQEQFPEQVNQLILAFLAKH 312
+IPEG+HFVQEQFP+ VNQL++ F++KH
Sbjct: 283 YIPEGSHFVQEQFPDLVNQLVIDFVSKH 310
>gb|AAL58275.1|AC068923_17 putative epoxide hydrolase [Oryza sativa (japonica cultivar-group)]
Length = 323
Score = 90.5 bits (223), Expect = 1e-17
Identities = 42/86 (48%), Positives = 57/86 (65%)
Frame = -2
Query: 569 LQVPYRSLGEDFNLSDPVVKVPALVITGGKDYSLKFPGIGDLIKGEKAKEFVPNLETAFI 390
LQ+PYRSL + + D +VP V+ G KDY KFPG+ IK + P+++ +I
Sbjct: 234 LQMPYRSLHKRKPIGDAKFQVPVFVVMGEKDYVYKFPGVESAIKDGTMERHAPDMKITYI 293
Query: 389 PEGTHFVQEQFPEQVNQLILAFLAKH 312
PEG+HFVQEQFP+ VN+L+LAFL H
Sbjct: 294 PEGSHFVQEQFPDYVNELLLAFLKDH 319
>gb|AAL58278.1|AC068923_20 putative epoxide hydrolase [Oryza sativa (japonica cultivar-group)]
Length = 287
Score = 90.1 bits (222), Expect = 2e-17
Identities = 41/86 (47%), Positives = 59/86 (67%)
Frame = -2
Query: 569 LQVPYRSLGEDFNLSDPVVKVPALVITGGKDYSLKFPGIGDLIKGEKAKEFVPNLETAFI 390
LQ+PYRS+ ++ + D +VP V+ G KDY K PGI ++K ++ P+L+ +I
Sbjct: 198 LQMPYRSMHQNKPIGDAKFQVPVFVVMGEKDYVFKIPGIESVMKDGSMEKHAPDLKITYI 257
Query: 389 PEGTHFVQEQFPEQVNQLILAFLAKH 312
PEG+HFVQEQFPE VN+L+L+FL H
Sbjct: 258 PEGSHFVQEQFPEFVNELLLSFLKDH 283
>gb|AAL58264.1|AC068923_6 putative epoxide hydrolase [Oryza sativa (japonica cultivar-group)]
Length = 320
Score = 88.2 bits (217), Expect = 7e-17
Identities = 39/86 (45%), Positives = 56/86 (64%)
Frame = -2
Query: 569 LQVPYRSLGEDFNLSDPVVKVPALVITGGKDYSLKFPGIGDLIKGEKAKEFVPNLETAFI 390
LQ+PYR++ + D +VP L++ G KDY+ KFPG ++G + F P L+ F+
Sbjct: 230 LQMPYRAVHRRPSRKDARFEVPVLMVIGEKDYAFKFPGFEAAVRGGAMERFAPELKIEFL 289
Query: 389 PEGTHFVQEQFPEQVNQLILAFLAKH 312
PEG+HF QEQ PEQVN+L+L F +H
Sbjct: 290 PEGSHFAQEQLPEQVNRLLLGFFTEH 315
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 486,683,322
Number of Sequences: 1393205
Number of extensions: 10129735
Number of successful extensions: 21416
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 20912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21393
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
