Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004655A_C01 KMC004655A_c01
(596 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195452.1| cytochrome p450 family; protein id: At4g37360.1... 99 9e-37
emb|CAB16768.1| cytochrome like protein [Arabidopsis thaliana] 99 9e-37
sp|Q9FG65|C911_ARATH Cytochrome P450 91A1 gi|9759034|dbj|BAB0936... 92 1e-35
pir||T52174 cytochrome P450 monooxygenase [imported] - Arabidops... 92 1e-35
ref|NP_568533.1| cytochrome p450 family; protein id: At5g36220.1... 92 1e-35
>ref|NP_195452.1| cytochrome p450 family; protein id: At4g37360.1 [Arabidopsis
thaliana] gi|7430662|pir||T04730 cytochrome P450 homolog
F6G17.10 - Arabidopsis thaliana
gi|4468802|emb|CAB38203.1| cytochrome p450-like protein
[Arabidopsis thaliana] gi|7270718|emb|CAB80401.1|
cytochrome p450-like protein [Arabidopsis thaliana]
Length = 499
Score = 99.0 bits (245), Expect(2) = 9e-37
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -3
Query: 591 VGGYHVPRNTMLMVNAWAIHRDPNLWVDPLPFVPERFENGGADARWVIPFGMGRRSCPGS 412
VGGY +PR TML+ NAWAIHRDP LW DP F PERFE G +A+ ++PFG+GRR+CPGS
Sbjct: 379 VGGYDMPRGTMLLTNAWAIHRDPLLWDDPTSFKPERFEKEG-EAKKLMPFGLGRRACPGS 437
Query: 411 GLAQR 397
GLAQR
Sbjct: 438 GLAQR 442
Score = 76.6 bits (187), Expect(2) = 9e-37
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = -1
Query: 386 LTLGSLIQCFEWKRIGTEEIDMTEGRGTIIPKAIPLEALCKARPIINKI 240
L+LGSLIQCFEW+RIG EE+DMTEG G +PKA PLEA+C+AR + KI
Sbjct: 446 LSLGSLIQCFEWERIGEEEVDMTEGPGLTMPKARPLEAMCRARDFVGKI 494
>emb|CAB16768.1| cytochrome like protein [Arabidopsis thaliana]
Length = 185
Score = 99.0 bits (245), Expect(2) = 9e-37
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -3
Query: 591 VGGYHVPRNTMLMVNAWAIHRDPNLWVDPLPFVPERFENGGADARWVIPFGMGRRSCPGS 412
VGGY +PR TML+ NAWAIHRDP LW DP F PERFE G +A+ ++PFG+GRR+CPGS
Sbjct: 65 VGGYDMPRGTMLLTNAWAIHRDPLLWDDPTSFKPERFEKEG-EAKKLMPFGLGRRACPGS 123
Query: 411 GLAQR 397
GLAQR
Sbjct: 124 GLAQR 128
Score = 76.6 bits (187), Expect(2) = 9e-37
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = -1
Query: 386 LTLGSLIQCFEWKRIGTEEIDMTEGRGTIIPKAIPLEALCKARPIINKI 240
L+LGSLIQCFEW+RIG EE+DMTEG G +PKA PLEA+C+AR + KI
Sbjct: 132 LSLGSLIQCFEWERIGEEEVDMTEGPGLTMPKARPLEAMCRARDFVGKI 180
>sp|Q9FG65|C911_ARATH Cytochrome P450 91A1 gi|9759034|dbj|BAB09361.1| cytochrome P450
[Arabidopsis thaliana] gi|20147351|gb|AAM10388.1|
AT5g36220/T30G6_3 [Arabidopsis thaliana]
gi|24111351|gb|AAN46799.1| At5g36220/T30G6_3
[Arabidopsis thaliana]
Length = 502
Score = 91.7 bits (226), Expect(2) = 1e-35
Identities = 42/68 (61%), Positives = 51/68 (74%)
Frame = -3
Query: 591 VGGYHVPRNTMLMVNAWAIHRDPNLWVDPLPFVPERFENGGADARWVIPFGMGRRSCPGS 412
+G Y +PR T L+VNAWAIHRDPN W DP F PERFE +A+ ++ FG+GRR+CPGS
Sbjct: 385 IGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERFEK-EEEAQKLLAFGLGRRACPGS 443
Query: 411 GLAQRTYG 388
GLAQR G
Sbjct: 444 GLAQRIVG 451
Score = 80.1 bits (196), Expect(2) = 1e-35
Identities = 34/51 (66%), Positives = 43/51 (83%)
Frame = -1
Query: 392 MGLTLGSLIQCFEWKRIGTEEIDMTEGRGTIIPKAIPLEALCKARPIINKI 240
+GL LGSLIQCFEW+R+G E+DM EG G +PKAIPL+A+CKARP ++KI
Sbjct: 450 VGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAICKARPFLHKI 500
>pir||T52174 cytochrome P450 monooxygenase [imported] - Arabidopsis thaliana
(fragment) gi|3164142|dbj|BAA28538.1| cytochrome P450
monooxygenase [Arabidopsis thaliana]
Length = 500
Score = 91.7 bits (226), Expect(2) = 1e-35
Identities = 42/68 (61%), Positives = 51/68 (74%)
Frame = -3
Query: 591 VGGYHVPRNTMLMVNAWAIHRDPNLWVDPLPFVPERFENGGADARWVIPFGMGRRSCPGS 412
+G Y +PR T L+VNAWAIHRDPN W DP F PERFE +A+ ++ FG+GRR+CPGS
Sbjct: 383 IGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERFEK-EEEAQKLLAFGLGRRACPGS 441
Query: 411 GLAQRTYG 388
GLAQR G
Sbjct: 442 GLAQRIVG 449
Score = 80.1 bits (196), Expect(2) = 1e-35
Identities = 34/51 (66%), Positives = 43/51 (83%)
Frame = -1
Query: 392 MGLTLGSLIQCFEWKRIGTEEIDMTEGRGTIIPKAIPLEALCKARPIINKI 240
+GL LGSLIQCFEW+R+G E+DM EG G +PKAIPL+A+CKARP ++KI
Sbjct: 448 VGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAICKARPFLHKI 498
>ref|NP_568533.1| cytochrome p450 family; protein id: At5g36220.1, supported by cDNA:
gi_3164141 [Arabidopsis thaliana]
Length = 429
Score = 91.7 bits (226), Expect(2) = 1e-35
Identities = 42/68 (61%), Positives = 51/68 (74%)
Frame = -3
Query: 591 VGGYHVPRNTMLMVNAWAIHRDPNLWVDPLPFVPERFENGGADARWVIPFGMGRRSCPGS 412
+G Y +PR T L+VNAWAIHRDPN W DP F PERFE +A+ ++ FG+GRR+CPGS
Sbjct: 312 IGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERFEK-EEEAQKLLAFGLGRRACPGS 370
Query: 411 GLAQRTYG 388
GLAQR G
Sbjct: 371 GLAQRIVG 378
Score = 80.1 bits (196), Expect(2) = 1e-35
Identities = 34/51 (66%), Positives = 43/51 (83%)
Frame = -1
Query: 392 MGLTLGSLIQCFEWKRIGTEEIDMTEGRGTIIPKAIPLEALCKARPIINKI 240
+GL LGSLIQCFEW+R+G E+DM EG G +PKAIPL+A+CKARP ++KI
Sbjct: 377 VGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAICKARPFLHKI 427
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 573,790,234
Number of Sequences: 1393205
Number of extensions: 13825939
Number of successful extensions: 44659
Number of sequences better than 10.0: 2436
Number of HSP's better than 10.0 without gapping: 39752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42783
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
