Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004650A_C01 KMC004650A_c01
(612 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200117.1| unknown protein; protein id: At5g53050.1 [Arabi... 45 6e-04
gb|EAA21175.1| hypothetical protein [Plasmodium yoelii yoelii] 36 0.45
ref|XP_146391.2| similar to hypothetical protein FLJ14345 [Homo ... 34 1.3
gb|EAA29829.1| predicted protein [Neurospora crassa] 32 6.5
gb|EAA06988.1| agCP7202 [Anopheles gambiae str. PEST] 32 6.5
>ref|NP_200117.1| unknown protein; protein id: At5g53050.1 [Arabidopsis thaliana]
gi|8809594|dbj|BAA97145.1| gene_id:MNB8.11~unknown
protein [Arabidopsis thaliana]
Length = 438
Score = 45.4 bits (106), Expect = 6e-04
Identities = 20/36 (55%), Positives = 26/36 (71%)
Frame = -1
Query: 594 ENLHLFLLYLFGLIVMAFEYGRKLLGSFKPVRVGSS 487
E H FLL+LFGL+V+AFEY R+ + PV+VG S
Sbjct: 401 EKFHGFLLFLFGLLVLAFEYSRRAFRAVNPVKVGPS 436
>gb|EAA21175.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 2172
Score = 35.8 bits (81), Expect = 0.45
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 10 TYSQFFSYIFVSYHVTSY---ITF--SFSFVYVSICTMQNADDVHVSFSNIK 150
T+ SY+F SY Y + F +FSF+ SIC MQ VH+ + N+K
Sbjct: 166 TFGSIISYVFKSYLTFFYPLIVPFRGAFSFILSSICLMQFGKIVHMIYKNLK 217
>ref|XP_146391.2| similar to hypothetical protein FLJ14345 [Homo sapiens] [Mus
musculus]
Length = 664
Score = 34.3 bits (77), Expect = 1.3
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Frame = +1
Query: 118 DDVHVSFSNIKCTL*SAIAVSLFCLYKLLT-TQSTWNSCCQ*RDMLGSCVSTNEGSSLAF 294
DDVHV+F+ + L A SL+ L T + T C + G +S++ SS+ F
Sbjct: 86 DDVHVNFTGEEWVLLDASQKSLYRDVMLETYSNLTAIGKCYECNHCGKSLSSSSLSSVVF 145
Query: 295 RPLERNPPSHERNESKLPYT*ASYCGR-----SAVISPIRVYNGYISPTCNKC 438
+ +E+ +HER + PY + CG+ S + R+ G CN+C
Sbjct: 146 KDVEK--LTHERGPGEKPYE-YTQCGKAFAQHSHLQGHERILTGKKPYECNQC 195
>gb|EAA29829.1| predicted protein [Neurospora crassa]
Length = 429
Score = 32.0 bits (71), Expect = 6.5
Identities = 30/94 (31%), Positives = 43/94 (44%), Gaps = 5/94 (5%)
Frame = -3
Query: 508 TSSSWKFLLVHLKVNNSLPSYFLHTYCRW-VICNRCKP*WE---RSQHFFRNMRLTYTA- 344
T W+FL+ HL+ N L T + V+ + + W+ + +F RL Y A
Sbjct: 19 TLEQWEFLVHHLQTPNLRAQDCLETVLAYMVVAVKHESTWKTRMMREDYFPISRLYYCAF 78
Query: 343 ILIHFSHEKEGFSQAGEKQERILHLCSRTTLTYP 242
+L+H E F Q G ILH+ S TL YP
Sbjct: 79 LLVHPHFEVPAFWQMG---MHILHMLS--TLNYP 107
>gb|EAA06988.1| agCP7202 [Anopheles gambiae str. PEST]
Length = 410
Score = 32.0 bits (71), Expect = 6.5
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 404 TTVTYHPPAISV*EITWEGVIDFQVYEEELPTRTGLKLPRSFLPY----SNAITMRPNKY 571
T V+ P +S EIT EG+ F + EE + T L L R LPY SN + P +Y
Sbjct: 25 TKVSPTLPILSRFEITTEGLKRFNISEEGICQSTSLPLCRGVLPYDLTVSNNRQLSPLEY 84
Query: 572 N 574
+
Sbjct: 85 D 85
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,176,761
Number of Sequences: 1393205
Number of extensions: 11094156
Number of successful extensions: 27393
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27365
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
