Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004635A_C01 KMC004635A_c01
(521 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC10906.1| cysteine proteinase [Zinnia elegans] 218 4e-56
ref|NP_564126.1| cysteine proteinase XCP2; protein id: At1g20850... 208 3e-53
ref|NP_567983.1| cysteine protease XCP1; protein id: At4g35350.1... 201 4e-51
pir||S71773 cysteine proteinase (EC 3.4.22.-) precursor - Zinnia... 193 9e-49
dbj|BAB63672.1| putative cysteine proteinase [Oryza sativa (japo... 190 7e-48
>dbj|BAC10906.1| cysteine proteinase [Zinnia elegans]
Length = 352
Score = 218 bits (554), Expect = 4e-56
Identities = 98/123 (79%), Positives = 111/123 (89%)
Frame = -2
Query: 520 CEMSKEESQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCG 341
C+ K+ S+ VTISGYHDVP+N+E S LKALANQP+SVAIEASGRDFQFYSGGVFDGHCG
Sbjct: 230 CDEKKDVSEKVTISGYHDVPRNDEASFLKALANQPISVAIEASGRDFQFYSGGVFDGHCG 289
Query: 340 TQLDHGVAAVGYGTSKGLDYITVKNSWGTKWGEKGYIRFRRNNGKPEGMCGLYKMASYPT 161
T+LDHGVAAVGYGT+KGLDY+ V+NSWG KWGEKGYIR +R +GKP GMCGLY MASYPT
Sbjct: 290 TELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEKGYIRMKRGSGKPHGMCGLYMMASYPT 349
Query: 160 KKK 152
K+K
Sbjct: 350 KQK 352
>ref|NP_564126.1| cysteine proteinase XCP2; protein id: At1g20850.1, supported by
cDNA: gi_6708182 [Arabidopsis thaliana]
gi|25289989|pir||A86341 cysteine proteinase (EC
3.4.22.-) [similarity] - Arabidopsis thaliana
gi|4836904|gb|AAD30607.1|AC007369_17 Putative cysteine
proteinase [Arabidopsis thaliana]
gi|6708183|gb|AAF25832.1|AF191028_1 papain-type cysteine
endopeptidase XCP2 [Arabidopsis thaliana]
gi|28466959|gb|AAO44088.1| At1g20850 [Arabidopsis
thaliana]
Length = 356
Score = 208 bits (529), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = -2
Query: 520 CEMSKEESQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCG 341
CEM K+ES+ VTI+G+ DVP N+E+SLLKALA+QPLSVAI+ASGR+FQFYSGGVFDG CG
Sbjct: 234 CEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGRCG 293
Query: 340 TQLDHGVAAVGYGTSKGLDYITVKNSWGTKWGEKGYIRFRRNNGKPEGMCGLYKMASYPT 161
LDHGVAAVGYG+SKG DYI VKNSWG KWGEKGYIR +RN GKPEG+CG+ KMAS+PT
Sbjct: 294 VDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMASFPT 353
Query: 160 KKK 152
K K
Sbjct: 354 KTK 356
>ref|NP_567983.1| cysteine protease XCP1; protein id: At4g35350.1, supported by cDNA:
gi_6708180 [Arabidopsis thaliana] gi|7435808|pir||T06122
cysteine proteinase (EC 3.4.22.-) F23E12.90 -
Arabidopsis thaliana gi|3080415|emb|CAA18734.1| cysteine
proteinase-like protein [Arabidopsis thaliana]
gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine
endopeptidase XCP1 [Arabidopsis thaliana]
gi|7270487|emb|CAB80252.1| cysteine proteinase-like
protein [Arabidopsis thaliana]
gi|26449881|dbj|BAC42063.1| putative cysteine proteinase
[Arabidopsis thaliana] gi|28827736|gb|AAO50712.1|
unknown protein [Arabidopsis thaliana]
Length = 355
Score = 201 bits (511), Expect = 4e-51
Identities = 90/123 (73%), Positives = 108/123 (87%)
Frame = -2
Query: 520 CEMSKEESQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCG 341
C+ KE+ + VTISGY DVP+N+++SL+KALA+QP+SVAIEASGRDFQFY GGVF+G CG
Sbjct: 233 CQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCG 292
Query: 340 TQLDHGVAAVGYGTSKGLDYITVKNSWGTKWGEKGYIRFRRNNGKPEGMCGLYKMASYPT 161
T LDHGVAAVGYG+SKG DY+ VKNSWG +WGEKG+IR +RN GKPEG+CG+ KMASYPT
Sbjct: 293 TDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMASYPT 352
Query: 160 KKK 152
K K
Sbjct: 353 KTK 355
>pir||S71773 cysteine proteinase (EC 3.4.22.-) precursor - Zinnia elegans
gi|641905|gb|AAC49406.1| cysteine proteinase
Length = 342
Score = 193 bits (491), Expect = 9e-49
Identities = 87/108 (80%), Positives = 97/108 (89%)
Frame = -2
Query: 520 CEMSKEESQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCG 341
C+ ++ S+ VTISGYHDVP+NNE S LKALANQP+SVAIEASGRDFQFYSGGVFDGHCG
Sbjct: 230 CDEKRDASEKVTISGYHDVPRNNEDSFLKALANQPISVAIEASGRDFQFYSGGVFDGHCG 289
Query: 340 TQLDHGVAAVGYGTSKGLDYITVKNSWGTKWGEKGYIRFRRNNGKPEG 197
T+LDHGVAAVGYGTSKGLDY+ V+NSWG KWGEKGYIR +RN GKP G
Sbjct: 290 TELDHGVAAVGYGTSKGLDYVIVRNSWGPKWGEKGYIRMKRNTGKPMG 337
>dbj|BAB63672.1| putative cysteine proteinase [Oryza sativa (japonica
cultivar-group)]
Length = 365
Score = 190 bits (483), Expect = 7e-48
Identities = 91/117 (77%), Positives = 102/117 (86%), Gaps = 1/117 (0%)
Frame = -2
Query: 505 EESQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCGTQLDH 326
E + VTISGY DVP+NNEQ+LLKALA+QP+SVAIEASGR+FQFYSGGVFDG CGT+LDH
Sbjct: 247 EAAAAVTISGYEDVPRNNEQALLKALAHQPVSVAIEASGRNFQFYSGGVFDGPCGTRLDH 306
Query: 325 GVAAVGYGT-SKGLDYITVKNSWGTKWGEKGYIRFRRNNGKPEGMCGLYKMASYPTK 158
GV AVGYGT SKG DYI VKNSWG+ WGEKGYIR RR GK +G+CG+ KMASYPTK
Sbjct: 307 GVTAVGYGTASKGHDYIIVKNSWGSHWGEKGYIRMRRGTGKHDGLCGINKMASYPTK 363
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,045,245
Number of Sequences: 1393205
Number of extensions: 11079348
Number of successful extensions: 28735
Number of sequences better than 10.0: 1054
Number of HSP's better than 10.0 without gapping: 27148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27939
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
