Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004633A_C01 KMC004633A_c01
(353 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171626.1| hypothetical protein; protein id: At1g01180.1 [... 84 5e-16
ref|NP_715270.1| Leucyl aminopeptidase [Wigglesworthia brevipalp... 36 0.11
ref|NP_704659.1| hypothetical protein [Plasmodium falciparum 3D7... 32 2.7
ref|NP_193165.1| hypothetical protein; protein id: At4g14290.1 [... 31 3.5
gb|AAC39212.1| immunoglobulin mu heavy chain VDJ region [Oryctol... 31 3.5
>ref|NP_171626.1| hypothetical protein; protein id: At1g01180.1 [Arabidopsis
thaliana] gi|25406717|pir||A86142 protein T25K16.17
[imported] - Arabidopsis thaliana
gi|6715637|gb|AAF26464.1|AC007323_5 T25K16.17
[Arabidopsis thaliana]
Length = 478
Score = 84.0 bits (206), Expect = 5e-16
Identities = 38/47 (80%), Positives = 43/47 (90%)
Frame = -1
Query: 353 RILPPGGVIFGHDYFTAADNRGVRRAVDLFARIHSLKVKINGQHWIM 213
RIL PGGVIFGHDYFTAADNRGVRRAV+LFA I+ LKVK +GQHW++
Sbjct: 255 RILRPGGVIFGHDYFTAADNRGVRRAVNLFAEINRLKVKTDGQHWVI 301
>ref|NP_715270.1| Leucyl aminopeptidase [Wigglesworthia brevipalpis]
gi|25166415|dbj|BAC24605.1| pepA [Wigglesworthia
brevipalpis]
Length = 501
Score = 36.2 bits (82), Expect = 0.11
Identities = 21/59 (35%), Positives = 31/59 (51%)
Frame = +3
Query: 153 YVYESIYEAQKYRSMNLRQSHYPMLAINFYLETVNSGKQVNRSSNPSIIRSSKIIMPEN 329
Y+YES+YE ++S Y M I FY+ N KQ N + + S+ S II+ +N
Sbjct: 132 YIYESLYEFNNFKSKTKSYKIY-MKEIMFYIHDENEIKQANIAISHSVSISKGIIITKN 189
>ref|NP_704659.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23505019|emb|CAD51802.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 413
Score = 31.6 bits (70), Expect = 2.7
Identities = 27/102 (26%), Positives = 43/102 (41%), Gaps = 21/102 (20%)
Frame = +3
Query: 96 HILISNRKN--NNREGI*IYVYVYESIYEAQKYRSMNLRQ------------SHYPMLAI 233
HI+ S +KN NN V +YES +K + N RQ +++ +
Sbjct: 93 HIIDSTKKNTSNNNNNNSNIVGIYESQVHEEKIKEDNTRQDNINKKENEIINNNHQIPVS 152
Query: 234 NFYLETVNSGKQVNRSS-------NPSIIRSSKIIMPENNPT 338
N + E +++ K S+ NP +I S+ I NN T
Sbjct: 153 NIFSENIDNNKNYIESNYKSTYNNNPELIHSTDFIGSNNNHT 194
>ref|NP_193165.1| hypothetical protein; protein id: At4g14290.1 [Arabidopsis
thaliana] gi|7485140|pir||F71404 hypothetical protein -
Arabidopsis thaliana gi|2244785|emb|CAB10208.1|
hypothetical protein [Arabidopsis thaliana]
gi|7268134|emb|CAB78471.1| hypothetical protein
[Arabidopsis thaliana]
Length = 505
Score = 31.2 bits (69), Expect = 3.5
Identities = 14/54 (25%), Positives = 31/54 (56%)
Frame = -2
Query: 328 FSGMIILLLRIIEGLEERLTCLPEFTVSR*KLMANIG*WLCRKFIDLYFCASYI 167
FS ++ L++ +++ + RL P+FTVS+ K + ++ +C + + F Y+
Sbjct: 216 FSDLVDLMMELVDTYKFRL---PKFTVSKSKFVVSVSCGICSSYYKIKFAIQYM 266
>gb|AAC39212.1| immunoglobulin mu heavy chain VDJ region [Oryctolagus cuniculus]
Length = 125
Score = 31.2 bits (69), Expect = 3.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 190 LYFCASYIDSYTYT*IYIPSLLL 122
+YFCA Y+D Y YT I+ P L+
Sbjct: 98 MYFCARYVDGYYYTNIWGPGTLV 120
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 276,170,562
Number of Sequences: 1393205
Number of extensions: 5115586
Number of successful extensions: 10767
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10711
length of database: 448,689,247
effective HSP length: 93
effective length of database: 319,121,182
effective search space used: 7658908368
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
