Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004584A_C01 KMC004584A_c01
(649 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D84859 probable MAP kinase [imported] - Arabidopsis thaliana 77 2e-13
ref|NP_565989.1| putative MAP kinase; protein id: At2g42880.1, s... 77 2e-13
gb|AAN75467.1| mitogen-activated protein kinase [Lycopersicon es... 49 4e-05
dbj|BAB89473.1| MAP kinase-like protein [Oryza sativa (japonica ... 44 0.001
emb|CAD54742.1| putative mitogen-activated protein kinase wjumk1... 40 0.021
>pir||D84859 probable MAP kinase [imported] - Arabidopsis thaliana
Length = 594
Score = 77.0 bits (188), Expect = 2e-13
Identities = 41/72 (56%), Positives = 51/72 (69%), Gaps = 5/72 (6%)
Frame = -3
Query: 647 PEIAINIDTNPFFMTRAGVDKLEQ-GDRIAIDTNLLQSKAPYGGINAAA----GATAHRK 483
P++AINID NPF M R G++K E DRI IDTNLLQ+ A G AAA G +AHRK
Sbjct: 523 PDVAINIDNNPFIMARTGMNKAENISDRIIIDTNLLQATAGIGVAAAAAAAAPGGSAHRK 582
Query: 482 VGPVQYGMARMF 447
VG V+YGM++M+
Sbjct: 583 VGAVRYGMSKMY 594
>ref|NP_565989.1| putative MAP kinase; protein id: At2g42880.1, supported by cDNA:
gi_15724283 [Arabidopsis thaliana]
gi|15724284|gb|AAL06535.1|AF412082_1 At2g42880/F7D19.12
[Arabidopsis thaliana] gi|20197964|gb|AAD21721.2|
putative MAP kinase [Arabidopsis thaliana]
gi|24111303|gb|AAN46775.1| At2g42880/F7D19.12
[Arabidopsis thaliana]
Length = 606
Score = 77.0 bits (188), Expect = 2e-13
Identities = 41/72 (56%), Positives = 51/72 (69%), Gaps = 5/72 (6%)
Frame = -3
Query: 647 PEIAINIDTNPFFMTRAGVDKLEQ-GDRIAIDTNLLQSKAPYGGINAAA----GATAHRK 483
P++AINID NPF M R G++K E DRI IDTNLLQ+ A G AAA G +AHRK
Sbjct: 535 PDVAINIDNNPFIMARTGMNKAENISDRIIIDTNLLQATAGIGVAAAAAAAAPGGSAHRK 594
Query: 482 VGPVQYGMARMF 447
VG V+YGM++M+
Sbjct: 595 VGAVRYGMSKMY 606
>gb|AAN75467.1| mitogen-activated protein kinase [Lycopersicon esculentum]
Length = 528
Score = 49.3 bits (116), Expect = 4e-05
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = -3
Query: 641 IAINIDTNPFFMTRAGVDKLEQGDRIAIDTNLLQSKAPYGGINAAAGA-TAHRKVGPVQY 465
+++ ++TNP++ + V +L G +IAID LLQ++ +G + AAA A AHR+VG +QY
Sbjct: 468 MSVEMNTNPYYPAQEKVAQL--GGQIAIDAKLLQAQTKFGAVGAAAVAVAAHREVGTIQY 525
Query: 464 GM 459
+
Sbjct: 526 SL 527
>dbj|BAB89473.1| MAP kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 651
Score = 44.3 bits (103), Expect = 0.001
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = -3
Query: 644 EIAINIDTNPFFMTRAGVDKLEQGDRIAIDTNLLQSKAPYGGINAAAG--ATAHRKVGPV 471
++A+++ PF ++ G K + +R+A +TNL +++ G AAG A+AHRKVG V
Sbjct: 587 DVALDMRAPPFHLS--GGPKSDSSERLAAETNLY-TRSLNGLAATAAGVAASAHRKVGVV 643
Query: 470 QYGMARMF 447
YGM+RM+
Sbjct: 644 PYGMSRMY 651
>emb|CAD54742.1| putative mitogen-activated protein kinase wjumk1 [Oryza sativa
(japonica cultivar-group)]
Length = 569
Score = 40.4 bits (93), Expect = 0.021
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = -3
Query: 632 NIDTNPFFMTRAGVDKLEQGDRIAIDTNLLQSKAPYGGINAAAGATAHRKVGPVQYGMAR 453
++ + +++++A K + DR A+ +N++Q P+ GI A G + KV VQYG++R
Sbjct: 513 DLRASSYYVSKA---KSDVADRAALQSNMMQGIGPFNGIAAVGGN--YNKVSTVQYGVSR 567
Query: 452 MF 447
M+
Sbjct: 568 MY 569
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,351,425
Number of Sequences: 1393205
Number of extensions: 11888485
Number of successful extensions: 27088
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 26230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27065
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27576232529
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
