Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004583A_C01 KMC004583A_c01
(528 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195566.1| monooxygenase 2 (MO2); protein id: At4g38540.1 ... 174 4e-43
gb|AAK59785.1| AT4g38540/F20M13_100 [Arabidopsis thaliana] gi|27... 174 4e-43
ref|NP_196151.1| monooxygenase 2 (MO2), putative; protein id: At... 166 2e-40
gb|AAM61460.1| monooxygenase [Arabidopsis thaliana] 152 3e-36
dbj|BAC23045.1| monooxygenase [Solanum tuberosum] 133 1e-30
>ref|NP_195566.1| monooxygenase 2 (MO2); protein id: At4g38540.1 [Arabidopsis
thaliana] gi|7487957|pir||T05682 monooxygenase (EC
1.-.-.-) 2 - Arabidopsis thaliana
gi|3426064|emb|CAA07575.1| monooxygenase [Arabidopsis
thaliana] gi|4467141|emb|CAB37510.1| monooxygenase 2
(MO2) [Arabidopsis thaliana] gi|7270837|emb|CAB80518.1|
monooxygenase 2 (MO2) [Arabidopsis thaliana]
Length = 407
Score = 174 bits (442), Expect = 4e-43
Identities = 82/126 (65%), Positives = 101/126 (80%), Gaps = 2/126 (1%)
Frame = -3
Query: 526 NISKGNVCVAGDAHHPMTPDLGQGGCCALEDGVVLARCLAKAFSEKSKERKGEEEEE--Y 353
NI+K NVCVAGDA HPMTPD+GQGGC A+EDGV+LARCL +A KS + + EE EE Y
Sbjct: 280 NITKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILARCLGEAIKAKSLKGETEENEEEGY 339
Query: 352 KRIEESLKKYADERKWRSIDLISTAYMAGFVQQANSKWVTFIRDKILAIFLADMMLKKAN 173
KRIEE LKKYA ERKWRSIDLI+TAY GF+QQ+ KW+ RD+ L+ +L+ M+LKK++
Sbjct: 340 KRIEEGLKKYAGERKWRSIDLITTAYTVGFIQQSRGKWMNMFRDRFLSSYLSRMLLKKSH 399
Query: 172 FDCGTL 155
FDCG+L
Sbjct: 400 FDCGSL 405
>gb|AAK59785.1| AT4g38540/F20M13_100 [Arabidopsis thaliana]
gi|27764960|gb|AAO23601.1| At4g38540/F20M13_100
[Arabidopsis thaliana]
Length = 145
Score = 174 bits (442), Expect = 4e-43
Identities = 82/126 (65%), Positives = 101/126 (80%), Gaps = 2/126 (1%)
Frame = -3
Query: 526 NISKGNVCVAGDAHHPMTPDLGQGGCCALEDGVVLARCLAKAFSEKSKERKGEEEEE--Y 353
NI+K NVCVAGDA HPMTPD+GQGGC A+EDGV+LARCL +A KS + + EE EE Y
Sbjct: 18 NITKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILARCLGEAIKAKSLKGETEENEEEGY 77
Query: 352 KRIEESLKKYADERKWRSIDLISTAYMAGFVQQANSKWVTFIRDKILAIFLADMMLKKAN 173
KRIEE LKKYA ERKWRSIDLI+TAY GF+QQ+ KW+ RD+ L+ +L+ M+LKK++
Sbjct: 78 KRIEEGLKKYAGERKWRSIDLITTAYTVGFIQQSRGKWMNMFRDRFLSSYLSRMLLKKSH 137
Query: 172 FDCGTL 155
FDCG+L
Sbjct: 138 FDCGSL 143
>ref|NP_196151.1| monooxygenase 2 (MO2), putative; protein id: At5g05320.1, supported
by cDNA: 120478. [Arabidopsis thaliana]
gi|10176744|dbj|BAB09975.1| monooxygenase [Arabidopsis
thaliana] gi|27808600|gb|AAO24580.1| At5g05320
[Arabidopsis thaliana]
Length = 406
Score = 166 bits (419), Expect = 2e-40
Identities = 78/128 (60%), Positives = 101/128 (77%), Gaps = 3/128 (2%)
Frame = -3
Query: 526 NISKGNVCVAGDAHHPMTPDLGQGGCCALEDGVVLARCLAKAFSEKSKERKGEEEEE--- 356
NI+K NVCVAGDA HPMTPD+GQGGC A+EDGV+LARCL +A K+K KGE E+E
Sbjct: 279 NIAKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILARCLGEAM--KAKNMKGETEDENES 336
Query: 355 YKRIEESLKKYADERKWRSIDLISTAYMAGFVQQANSKWVTFIRDKILAIFLADMMLKKA 176
Y+RIE+ LKKYA RKWRSIDLI+T+Y GF+QQ+ KW+T RDK ++ FL+ + +KK+
Sbjct: 337 YRRIEDGLKKYAGSRKWRSIDLITTSYTVGFIQQSRGKWMTLFRDKFMSSFLSWLRVKKS 396
Query: 175 NFDCGTLN 152
+F+CG L+
Sbjct: 397 HFNCGRLS 404
>gb|AAM61460.1| monooxygenase [Arabidopsis thaliana]
Length = 392
Score = 152 bits (383), Expect = 3e-36
Identities = 72/113 (63%), Positives = 89/113 (78%), Gaps = 3/113 (2%)
Frame = -3
Query: 526 NISKGNVCVAGDAHHPMTPDLGQGGCCALEDGVVLARCLAKAFSEKSKERKGEEEEE--- 356
NI+K NVCVAGDA HPMTPD+GQGGC A+EDGV+LARCL +A K+K KGE E+E
Sbjct: 279 NIAKDNVCVAGDALHPMTPDIGQGGCSAMEDGVILARCLGEAM--KAKNMKGETEDENES 336
Query: 355 YKRIEESLKKYADERKWRSIDLISTAYMAGFVQQANSKWVTFIRDKILAIFLA 197
Y+RIE+ LKKYA RKWRSIDLI+T+Y GF+QQ+ KW+T RDK ++ FL+
Sbjct: 337 YRRIEDGLKKYAGSRKWRSIDLITTSYTVGFIQQSRGKWMTLFRDKFMSSFLS 389
>dbj|BAC23045.1| monooxygenase [Solanum tuberosum]
Length = 356
Score = 133 bits (335), Expect = 1e-30
Identities = 65/124 (52%), Positives = 86/124 (68%)
Frame = -3
Query: 526 NISKGNVCVAGDAHHPMTPDLGQGGCCALEDGVVLARCLAKAFSEKSKERKGEEEEEYKR 347
NI K NVCV GDA HPMTPDLGQGGC ALED VV+A+CL +A K +E++E +
Sbjct: 233 NILKNNVCVVGDALHPMTPDLGQGGCSALEDSVVIAKCLGEAL---IKPITKQEDDESTK 289
Query: 346 IEESLKKYADERKWRSIDLISTAYMAGFVQQANSKWVTFIRDKILAIFLADMMLKKANFD 167
I + L+KYA ER+WRS IS AY++GF+Q +++K ++F+R LA + L+ ANFD
Sbjct: 290 IRKGLEKYAKERRWRSFTFISAAYLSGFIQDSDNKIISFLRQHFLAGVTISVTLRIANFD 349
Query: 166 CGTL 155
CG L
Sbjct: 350 CGRL 353
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,225,381
Number of Sequences: 1393205
Number of extensions: 9321323
Number of successful extensions: 38860
Number of sequences better than 10.0: 181
Number of HSP's better than 10.0 without gapping: 33281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38068
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
