Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004577A_C01 KMC004577A_c01
(439 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG42354.1| lipoxygenase [Phaseolus vulgaris] 117 2e-26
pir||T12142 lipoxygenase (EC 1.13.11.12) 1 - fava bean gi|214342... 117 3e-26
pir||T06354 lipoxygenase (EC 1.13.11.12) - soybean gi|439857|gb|... 117 3e-26
sp|P38417|LOX4_SOYBN Lipoxygenase-4 (L-4) (VSP94) gi|7433159|pir... 117 3e-26
pir||T07036 lipoxygenase (EC 1.13.11.12) L-5 - soybean gi|123694... 114 2e-25
>gb|AAG42354.1| lipoxygenase [Phaseolus vulgaris]
Length = 874
Score = 117 bits (294), Expect = 2e-26
Identities = 52/76 (68%), Positives = 64/76 (83%)
Frame = -1
Query: 439 LGQRDGAEHWTSDTIALQAFNKFGKRLAEIEEQLIKKNKDVNLKNRYGPVSMPYTLLYPT 260
LG+RDG +HWTSD L+AF +FGK+LAEIEE+L+KKN D L+NR GP MPYTLLYP+
Sbjct: 799 LGERDGGDHWTSDAGPLEAFKRFGKKLAEIEEKLVKKNNDETLRNRTGPAKMPYTLLYPS 858
Query: 259 TEPGMTFRGIPNSVSI 212
+E G+TFRGIPNS+SI
Sbjct: 859 SEEGLTFRGIPNSISI 874
>pir||T12142 lipoxygenase (EC 1.13.11.12) 1 - fava bean gi|2143422|emb|CAA97845.1|
lipoxygenase [Vicia faba]
Length = 858
Score = 117 bits (293), Expect = 3e-26
Identities = 56/76 (73%), Positives = 65/76 (84%)
Frame = -1
Query: 439 LGQRDGAEHWTSDTIALQAFNKFGKRLAEIEEQLIKKNKDVNLKNRYGPVSMPYTLLYPT 260
LGQRD AE+WTSDT AL AF KFGK LAEIE QLI +N + +L+NR GPVSMPYTLLYP+
Sbjct: 783 LGQRDSAEYWTSDTNALAAFKKFGKTLAEIEGQLILRNNNESLRNRVGPVSMPYTLLYPS 842
Query: 259 TEPGMTFRGIPNSVSI 212
+E G+TFRGIPNS+SI
Sbjct: 843 SEEGLTFRGIPNSISI 858
>pir||T06354 lipoxygenase (EC 1.13.11.12) - soybean gi|439857|gb|AAA03726.1|
lipoxygenase
Length = 839
Score = 117 bits (293), Expect = 3e-26
Identities = 52/76 (68%), Positives = 65/76 (85%)
Frame = -1
Query: 439 LGQRDGAEHWTSDTIALQAFNKFGKRLAEIEEQLIKKNKDVNLKNRYGPVSMPYTLLYPT 260
LGQRDG ++WTSD L+AF +FGK+L EIE++LI+KNKD L+NRYGP MPYTLLYP+
Sbjct: 764 LGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS 823
Query: 259 TEPGMTFRGIPNSVSI 212
+E G+TFRGIPNS+SI
Sbjct: 824 SEEGLTFRGIPNSISI 839
>sp|P38417|LOX4_SOYBN Lipoxygenase-4 (L-4) (VSP94) gi|7433159|pir||T07662 lipoxygenase (EC
1.13.11.12) L-4 - soybean gi|2160320|dbj|BAA03101.1|
lipxygenase L-4 [Glycine max]
Length = 853
Score = 117 bits (293), Expect = 3e-26
Identities = 52/76 (68%), Positives = 65/76 (85%)
Frame = -1
Query: 439 LGQRDGAEHWTSDTIALQAFNKFGKRLAEIEEQLIKKNKDVNLKNRYGPVSMPYTLLYPT 260
LGQRDG ++WTSD L+AF +FGK+L EIE++LI+KNKD L+NRYGP MPYTLLYP+
Sbjct: 778 LGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS 837
Query: 259 TEPGMTFRGIPNSVSI 212
+E G+TFRGIPNS+SI
Sbjct: 838 SEEGLTFRGIPNSISI 853
>pir||T07036 lipoxygenase (EC 1.13.11.12) L-5 - soybean gi|1236949|gb|AAB67732.1|
lipoxygenase L-5 [Glycine max]
Length = 853
Score = 114 bits (286), Expect = 2e-25
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = -1
Query: 439 LGQRDGAEHWTSDTIALQAFNKFGKRLAEIEEQLIKKNKDVNLKNRYGPVSMPYTLLYPT 260
LGQRDG ++WTSD L+AF +FGK L EIE++LI+KN D L+NRYGP MPYTLLYP+
Sbjct: 778 LGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPS 837
Query: 259 TEPGMTFRGIPNSVSI 212
+E G+TFRGIPNS+SI
Sbjct: 838 SEEGLTFRGIPNSISI 853
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 369,260,671
Number of Sequences: 1393205
Number of extensions: 7509295
Number of successful extensions: 23177
Number of sequences better than 10.0: 152
Number of HSP's better than 10.0 without gapping: 22681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23142
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 6722674608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
