Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004555A_C01 KMC004555A_c01
(647 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564786.1| expressed protein; protein id: At1g61870.1, sup... 119 3e-26
gb|AAM62848.1| putative membrane-associated salt-inducible prote... 119 3e-26
ref|NP_172629.1| putative membrane-associated salt-inducible pro... 115 7e-25
dbj|BAB89045.1| P0684C02.1 [Oryza sativa (japonica cultivar-grou... 92 6e-18
pir||B96833 hypothetical protein F18B13.23 [imported] - Arabidop... 69 5e-11
>ref|NP_564786.1| expressed protein; protein id: At1g61870.1, supported by cDNA:
16387., supported by cDNA: gi_16226402, supported by
cDNA: gi_17065563 [Arabidopsis thaliana]
gi|7486692|pir||T02133 hypothetical protein F8K4.8 -
Arabidopsis thaliana gi|3367521|gb|AAC28506.1| Similar
to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene. [Arabidopsis thaliana]
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8
[Arabidopsis thaliana] gi|17065564|gb|AAL32936.1|
Unknown protein [Arabidopsis thaliana]
Length = 408
Score = 119 bits (299), Expect = 3e-26
Identities = 55/95 (57%), Positives = 72/95 (74%)
Frame = -1
Query: 647 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 468
KK+F M RG KP+S CYFTL ++LC+GGDFE+A + KESM+K WVP+F+ MK LV G
Sbjct: 312 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 371
Query: 467 LVGVSQTDDAKELIKQVKEKFTESSDKWDEIEAEL 363
L S+ ++AKELI QVKEKFT + + W+E+EA L
Sbjct: 372 LAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAAL 406
>gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 407
Score = 119 bits (299), Expect = 3e-26
Identities = 55/95 (57%), Positives = 72/95 (74%)
Frame = -1
Query: 647 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 468
KK+F M RG KP+S CYFTL ++LC+GGDFE+A + KESM+K WVP+F+ MK LV G
Sbjct: 311 KKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 370
Query: 467 LVGVSQTDDAKELIKQVKEKFTESSDKWDEIEAEL 363
L S+ ++AKELI QVKEKFT + + W+E+EA L
Sbjct: 371 LAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAAL 405
>ref|NP_172629.1| putative membrane-associated salt-inducible protein; protein id:
At1g11630.1, supported by cDNA: 38193., supported by
cDNA: gi_14326575, supported by cDNA: gi_19548050
[Arabidopsis thaliana] gi|25402674|pir||G86249
hypothetical protein [imported] - Arabidopsis thaliana
gi|4835794|gb|AAD30260.1|AC007296_21 Strong similarity
to gi|3367521 F8K4.8 from Arabidopsis thaliana BAC
gb|AC004392 gi|14326576|gb|AAK60332.1|AF385742_1
At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|19548051|gb|AAL87389.1| At1g11630/F25C20_22
[Arabidopsis thaliana] gi|21593339|gb|AAM65288.1|
putative membrane-associated salt-inducible protein
[Arabidopsis thaliana]
Length = 405
Score = 115 bits (287), Expect = 7e-25
Identities = 54/93 (58%), Positives = 68/93 (73%)
Frame = -1
Query: 641 VFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 462
+F M GYKP+S CYFTL H LC+GGDFE+A + +ESM+K WVP+F+ MK LV GL
Sbjct: 309 LFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLA 368
Query: 461 GVSQTDDAKELIKQVKEKFTESSDKWDEIEAEL 363
S+ D+AKELI VKEKFT + D W+E+EA L
Sbjct: 369 SRSKVDEAKELIAVVKEKFTRNVDLWNEVEAAL 401
>dbj|BAB89045.1| P0684C02.1 [Oryza sativa (japonica cultivar-group)]
gi|20160842|dbj|BAB89782.1| P0557A01.33 [Oryza sativa
(japonica cultivar-group)]
Length = 390
Score = 92.0 bits (227), Expect = 6e-18
Identities = 40/95 (42%), Positives = 65/95 (68%)
Frame = -1
Query: 647 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 468
K+++ +M K+G +S Y+ L ++LC+GGDF++A + E + WVP F+TMK LV G
Sbjct: 294 KRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNG 353
Query: 467 LVGVSQTDDAKELIKQVKEKFTESSDKWDEIEAEL 363
L G S+ D+AK +I+++KEKF + ++ W E+E L
Sbjct: 354 LAGSSRVDEAKGIIEKMKEKFPDKAEGWKEVEDAL 388
Score = 37.7 bits (86), Expect = 0.13
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = -1
Query: 644 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 465
KV MKK G P + LC+ G A + E + KG P++ T L+ G
Sbjct: 225 KVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGF 284
Query: 464 VGVSQTDDAKELIKQVKEK 408
++AK L K++ +K
Sbjct: 285 CKEGDLEEAKRLYKEMAKK 303
>pir||B96833 hypothetical protein F18B13.23 [imported] - Arabidopsis thaliana
gi|5902386|gb|AAD55488.1|AC009322_28 Hypothetical
protein [Arabidopsis thaliana]
Length = 419
Score = 68.9 bits (167), Expect = 5e-11
Identities = 30/80 (37%), Positives = 49/80 (60%)
Frame = -1
Query: 647 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 468
++V+ M +GYKP Y T+ H+LC+ G+F+ A+ + K+ M K W PN T++ L+ G
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 467 LVGVSQTDDAKELIKQVKEK 408
LV Q D AK +++ V +
Sbjct: 362 LVKKGQLDQAKSIMELVHRR 381
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 553,121,789
Number of Sequences: 1393205
Number of extensions: 11980538
Number of successful extensions: 36405
Number of sequences better than 10.0: 308
Number of HSP's better than 10.0 without gapping: 33980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36341
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27576232529
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
