Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004539A_C01 KMC004539A_c01
(397 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL24415.1| putative peroxidase ATP2a [Arabidopsis thaliana] ... 102 9e-22
ref|NP_181250.1| peroxidase, putative (ATP2a); protein id: At2g3... 102 9e-22
gb|AAM65003.1| putative peroxidase ATP2a [Arabidopsis thaliana] 102 9e-22
emb|CAA66961.1| peroxidase [Arabidopsis thaliana] 99 1e-20
pir||T06227 peroxidase (EC 1.11.1.7) 2, cationic - soybean gi|39... 77 5e-14
>gb|AAL24415.1| putative peroxidase ATP2a [Arabidopsis thaliana]
gi|20148519|gb|AAM10150.1| putative peroxidase ATP2a
[Arabidopsis thaliana]
Length = 227
Score = 102 bits (255), Expect = 9e-22
Identities = 46/60 (76%), Positives = 53/60 (87%)
Frame = -1
Query: 397 LLTVDEELATDPITSPYVIKMAADNEYFHQQFSRAIILLSENNPITGDQGEIRKDCRYVN 218
LL +D+ELATDP T+P+V KMAADN YFH+QFSR + LLSE NP+TGDQGEIRKDCRYVN
Sbjct: 168 LLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 227
>ref|NP_181250.1| peroxidase, putative (ATP2a); protein id: At2g37130.1, supported by
cDNA: 3571. [Arabidopsis thaliana]
gi|25453196|sp|Q42580|PE21_ARATH Peroxidase 21 precursor
(Atperox P21) (PRXR5) (ATP2a/ATP2b)
gi|25285611|pir||H84788 probable peroxidase ATP2a
[imported] - Arabidopsis thaliana
gi|1403138|emb|CAA66863.1| peroxidase ATP2a [Arabidopsis
thaliana] gi|4371288|gb|AAD18146.1| putative peroxidase
ATP2a [Arabidopsis thaliana]
Length = 327
Score = 102 bits (255), Expect = 9e-22
Identities = 46/60 (76%), Positives = 53/60 (87%)
Frame = -1
Query: 397 LLTVDEELATDPITSPYVIKMAADNEYFHQQFSRAIILLSENNPITGDQGEIRKDCRYVN 218
LL +D+ELATDP T+P+V KMAADN YFH+QFSR + LLSE NP+TGDQGEIRKDCRYVN
Sbjct: 268 LLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327
>gb|AAM65003.1| putative peroxidase ATP2a [Arabidopsis thaliana]
Length = 327
Score = 102 bits (255), Expect = 9e-22
Identities = 46/60 (76%), Positives = 53/60 (87%)
Frame = -1
Query: 397 LLTVDEELATDPITSPYVIKMAADNEYFHQQFSRAIILLSENNPITGDQGEIRKDCRYVN 218
LL +D+ELATDP T+P+V KMAADN YFH+QFSR + LLSE NP+TGDQGEIRKDCRYVN
Sbjct: 268 LLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327
>emb|CAA66961.1| peroxidase [Arabidopsis thaliana]
Length = 327
Score = 99.0 bits (245), Expect = 1e-20
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -1
Query: 397 LLTVDEELATDPITSPYVIKMAADNEYFHQQFSRAIILLSENNPITGDQGEIRKDCRYVN 218
LL +D+ELATD T+P+V KMAADN YFH+QFSR + LLSE NP+TGDQGEIRKDCRYVN
Sbjct: 268 LLVIDDELATDSRTAPFVAKMAADNGYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327
>pir||T06227 peroxidase (EC 1.11.1.7) 2, cationic - soybean
gi|3982596|gb|AAC83463.1| cationic peroxidase 2 [Glycine
max]
Length = 331
Score = 77.0 bits (188), Expect = 5e-14
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -1
Query: 397 LLTVDEELATDPITSPYVIKMAADNEYFHQQFSRAIILLSENNPITGDQGEIRKDCRYVN 218
LL VD +LA D T PYV KMA +YF ++FSRAI LLSENNP+TG +GEIRK C N
Sbjct: 266 LLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNAAN 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 328,853,832
Number of Sequences: 1393205
Number of extensions: 6417226
Number of successful extensions: 14010
Number of sequences better than 10.0: 368
Number of HSP's better than 10.0 without gapping: 13585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14007
length of database: 448,689,247
effective HSP length: 107
effective length of database: 299,616,312
effective search space used: 7190791488
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
