Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004535A_C01 KMC004535A_c01
(903 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42431.1| putative L-ascorbate peroxidase [Arabidopsis tha... 362 6e-99
dbj|BAC55634.1| OJ1081_B12.15 [Oryza sativa (japonica cultivar-g... 310 2e-83
ref|NP_194958.1| ascorbate peroxidase family; protein id: At4g32... 228 1e-58
dbj|BAB62533.1| peroxisome type ascorbate peroxidase [Hordeum vu... 149 4e-35
emb|CAD39837.1| OSJNBb0072N21.3 [Oryza sativa (japonica cultivar... 148 1e-34
>dbj|BAC42431.1| putative L-ascorbate peroxidase [Arabidopsis thaliana]
Length = 329
Score = 362 bits (928), Expect = 6e-99
Identities = 169/232 (72%), Positives = 201/232 (85%)
Frame = -3
Query: 889 YLFIKEEVRKVMSKGKAAGVLRLVFHDAGTFETAEKTGGMNGSVLYELERPENAGLKKSI 710
Y ++ E+RKV++KGKAAGVLRLVFHDAGTFE + +GG+NGS+ YELERPEN GLKKS+
Sbjct: 98 YPVMQNEIRKVVTKGKAAGVLRLVFHDAGTFELDDHSGGINGSIAYELERPENIGLKKSL 157
Query: 709 KVLQKAKTQIDAIQPVSWADLIAVAGAEAVEVCGVPAIQVSLGRQDSLGPDPEGKLPEES 530
KVL KAK ++D IQPVSWAD+I+VAG+EAV +CG P I V LGR DS PDPEGKLP E+
Sbjct: 158 KVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPET 217
Query: 529 LNASGLKKCFHRKGFTTQELVALSGAHTIGSKGFGGPTSFDNSYYKVLLEKPWASSGGMT 350
L+ASGLK+CF RKGF+TQELVALSGAHTIGSKGFG PT FDN+YYK+LLEKPW S+ MT
Sbjct: 218 LSASGLKECFKRKGFSTQELVALSGAHTIGSKGFGDPTVFDNAYYKILLEKPWTSTSKMT 277
Query: 349 SMIGLPSDHALVEDDECLRWIAKYAENENMFFEDFKNAYVKLVNSGVRWNSL 194
SM+GLPSDHALV+DDECLRW+ +YAE+++ FFEDF NAY+KLVNSG +WN L
Sbjct: 278 SMVGLPSDHALVQDDECLRWVKRYAEDQDKFFEDFTNAYIKLVNSGAKWNML 329
>dbj|BAC55634.1| OJ1081_B12.15 [Oryza sativa (japonica cultivar-group)]
Length = 331
Score = 310 bits (794), Expect = 2e-83
Identities = 152/228 (66%), Positives = 181/228 (78%)
Frame = -3
Query: 880 IKEEVRKVMSKGKAAGVLRLVFHDAGTFETAEKTGGMNGSVLYELERPENAGLKKSIKVL 701
I+ VR V+SK KAAG+LRL FHDAGTF+ A+K+GGMNGS++YE++RPEN GL KSIKVL
Sbjct: 103 IQNGVRNVLSKVKAAGMLRLAFHDAGTFDIADKSGGMNGSIIYEVDRPENTGLNKSIKVL 162
Query: 700 QKAKTQIDAIQPVSWADLIAVAGAEAVEVCGVPAIQVSLGRQDSLGPDPEGKLPEESLNA 521
KAK ID +Q VSWADLIAVAGAE+V +CG P I V LGR DS DP GKLPEE+L+A
Sbjct: 163 GKAKEVIDLVQQVSWADLIAVAGAESVALCGGPEIPVRLGRLDSSTADPAGKLPEETLDA 222
Query: 520 SGLKKCFHRKGFTTQELVALSGAHTIGSKGFGGPTSFDNSYYKVLLEKPWASSGGMTSMI 341
+ LK F +KGF+TQE+V LSGAHTIG KGFG P FDNSY+KVLLEKP SS GM +M+
Sbjct: 223 TALKTLFSKKGFSTQEMVVLSGAHTIGGKGFGNPNIFDNSYFKVLLEKPQPSSSGMPAMV 282
Query: 340 GLPSDHALVEDDECLRWIAKYAENENMFFEDFKNAYVKLVNSGVRWNS 197
GL +D AL EDDECLRWI YA+++ FF DFK+AY+KLVN+G W S
Sbjct: 283 GLRTDWALTEDDECLRWINLYAQDQAKFFADFKDAYIKLVNTGASWRS 330
>ref|NP_194958.1| ascorbate peroxidase family; protein id: At4g32320.1 [Arabidopsis
thaliana] gi|7487935|pir||T05342 L-ascorbate peroxidase
homolog F10M6.50 - Arabidopsis thaliana
gi|2864612|emb|CAA16959.1| L-ascorbate peroxidase - like
protein [Arabidopsis thaliana]
gi|4049334|emb|CAA22559.1| L-ascorbate peroxidase-like
protein [Arabidopsis thaliana]
gi|7270136|emb|CAB79949.1| L-ascorbate peroxidase-like
protein [Arabidopsis thaliana]
Length = 166
Score = 228 bits (580), Expect = 1e-58
Identities = 120/229 (52%), Positives = 144/229 (62%)
Frame = -3
Query: 880 IKEEVRKVMSKGKAAGVLRLVFHDAGTFETAEKTGGMNGSVLYELERPENAGLKKSIKVL 701
++ E+RKV++KGKAAGVLRLVFHDAGTFE + +
Sbjct: 1 MQNEIRKVVTKGKAAGVLRLVFHDAGTFELDDHS-------------------------- 34
Query: 700 QKAKTQIDAIQPVSWADLIAVAGAEAVEVCGVPAIQVSLGRQDSLGPDPEGKLPEESLNA 521
VSWAD+I+VAG+EAV +CG P I V LGR DS PDPEGKLP E+L+A
Sbjct: 35 ------------VSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSA 82
Query: 520 SGLKKCFHRKGFTTQELVALSGAHTIGSKGFGGPTSFDNSYYKVLLEKPWASSGGMTSMI 341
SGLK+CF RKGF+TQELVALSGAHTIGSKGFG PT FDN+YYK+LLEKPW
Sbjct: 83 SGLKECFKRKGFSTQELVALSGAHTIGSKGFGDPTVFDNAYYKILLEKPWT--------- 133
Query: 340 GLPSDHALVEDDECLRWIAKYAENENMFFEDFKNAYVKLVNSGVRWNSL 194
W+ +YAE+++ FFEDF NAY+KLVNSG +WN L
Sbjct: 134 ----------------WVKRYAEDQDKFFEDFTNAYIKLVNSGAKWNML 166
>dbj|BAB62533.1| peroxisome type ascorbate peroxidase [Hordeum vulgare subsp.
vulgare]
Length = 291
Score = 149 bits (377), Expect = 4e-35
Identities = 95/244 (38%), Positives = 140/244 (56%), Gaps = 17/244 (6%)
Frame = -3
Query: 892 EYLFIKEEVRK-----VMSKGKAAGVLRLVFHDAGTFETAEKTGGMNGSVLYELE--RPE 734
EYL + R+ + SKG A +LRL +HDAGT++ +TGG NGS+ YE E
Sbjct: 9 EYLRQVDRARRAFRALIASKGCAPIMLRLAWHDAGTYDVNTRTGGANGSIRYEEEYTHGS 68
Query: 733 NAGLKKSIKVLQKAKTQIDAIQPVSWADLIAVAGAEAVEVCGVPAIQVSLGRQDSLGPDP 554
NAGLK +I +L+ K + I ++ADL +AG AVEV G P ++ GR+DS
Sbjct: 69 NAGLKIAIDLLEPIKAKHPKI---TYADLHQLAGVVAVEVTGGPTVEFIPGRRDSSVCPR 125
Query: 553 EGKLPEESLNASGLKKCFHRKGFTTQELVALSGAHTIGS-----KGFGG-----PTSFDN 404
EG+LP+ A L+ F+R G T +++VALSG H++G GF G P FDN
Sbjct: 126 EGRLPDAKKGAPHLRDIFYRMGLTDKDIVALSGGHSLGKAHPERSGFDGAWTRDPLKFDN 185
Query: 403 SYYKVLLEKPWASSGGMTSMIGLPSDHALVEDDECLRWIAKYAENENMFFEDFKNAYVKL 224
SY+ LL+ G ++ LP+D AL++D E R++ YA++E++FF+D+ ++ KL
Sbjct: 186 SYFLELLK------GESEGLLKLPTDKALLDDPEFRRYVELYAKDEDVFFKDYAESHKKL 239
Query: 223 VNSG 212
G
Sbjct: 240 SELG 243
>emb|CAD39837.1| OSJNBb0072N21.3 [Oryza sativa (japonica cultivar-group)]
Length = 291
Score = 148 bits (373), Expect = 1e-34
Identities = 94/244 (38%), Positives = 137/244 (55%), Gaps = 17/244 (6%)
Frame = -3
Query: 892 EYLFIKEEVRK-----VMSKGKAAGVLRLVFHDAGTFETAEKTGGMNGSVLY--ELERPE 734
EY+ E R+ + SK A +LRL +HDAGT++ A KTGG NGS+ + E
Sbjct: 10 EYMAEVERARRDLRALIASKSCAPIMLRLAWHDAGTYDKATKTGGPNGSIRFPQEYSHAA 69
Query: 733 NAGLKKSIKVLQKAKTQIDAIQPVSWADLIAVAGAEAVEVCGVPAIQVSLGRQDSLGPDP 554
NAG+K +I +L+ K + I ++ADL +AG AVEV G P I GR+DS
Sbjct: 70 NAGIKIAIDLLEPMKQKHPKI---TYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPE 126
Query: 553 EGKLPEESLNASGLKKCFHRKGFTTQELVALSGAHTIGS-----KGFGG-----PTSFDN 404
EG+LP+ A+ L++ F+R G + +++VALSG HT+G GF G P FDN
Sbjct: 127 EGRLPDAKKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDN 186
Query: 403 SYYKVLLEKPWASSGGMTSMIGLPSDHALVEDDECLRWIAKYAENENMFFEDFKNAYVKL 224
SY+ LL++ ++ LP+D ALVED R++ YA++E+ FF D+ ++ KL
Sbjct: 187 SYFIELLKE------NSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKL 240
Query: 223 VNSG 212
G
Sbjct: 241 SELG 244
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 796,326,197
Number of Sequences: 1393205
Number of extensions: 18108177
Number of successful extensions: 53642
Number of sequences better than 10.0: 916
Number of HSP's better than 10.0 without gapping: 49171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52325
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49086530664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
