Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004521A_C01 KMC004521A_c01
(472 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173652.1| UDP-glucose glucosyltransferase, putative; prot... 140 5e-33
ref|NP_564170.1| UDP-glucose glucosyltransferase, putative; prot... 137 7e-32
pir||F86356 T16E15.2 protein - Arabidopsis thaliana gi|9392678|g... 137 7e-32
pir||G86356 hypothetical protein T16E15.1 - Arabidopsis thaliana... 135 2e-31
pir||T06371 probable UDP-glucuronosyltransferase (EC 2.4.1.-) - ... 134 6e-31
>ref|NP_173652.1| UDP-glucose glucosyltransferase, putative; protein id: At1g22340.1
[Arabidopsis thaliana] gi|25286820|pir||C86356
UDP-glucose glucosyltransferase homolog - Arabidopsis
thaliana gi|9392680|gb|AAF87257.1|AC068562_4 Strong
similarity to UDP-glucose glucosyltransferase from
Arabidopsis thaliana gb|AB016819 and contains a
UDP-glucosyl transferase PF|00201 domain
Length = 487
Score = 140 bits (354), Expect = 5e-33
Identities = 62/108 (57%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Frame = -1
Query: 472 FLTHCGWNSTIESICAGVPMLCWPFVADQPTNCRYICNEWDIGIEVDTNVKREEVENLIH 293
FLTHCGWNST+ES+ GVPM+CWP ++QPTNC++ C+EW +GIE+ +VKREEVE ++
Sbjct: 378 FLTHCGWNSTLESLAGGVPMICWPCFSEQPTNCKFCCDEWGVGIEIGKDVKREEVETVVR 437
Query: 292 ELMVGDKGKKMRQRTMELKKKAEEDTR-PGGCSYMNLDKLIKEVLLKN 152
ELM G+KGKK+R++ E ++ AEE TR G S MNL+ LI +V L+N
Sbjct: 438 ELMDGEKGKKLREKAEEWRRLAEEATRYKHGSSVMNLETLIHKVFLEN 485
>ref|NP_564170.1| UDP-glucose glucosyltransferase, putative; protein id: At1g22370.1,
supported by cDNA: gi_14532545, supported by cDNA:
gi_18655386 [Arabidopsis thaliana]
gi|14532546|gb|AAK64001.1| At1g22370/T16E15_3
[Arabidopsis thaliana] gi|18655387|gb|AAL76149.1|
At1g22370/T16E15_3 [Arabidopsis thaliana]
Length = 309
Score = 137 bits (344), Expect = 7e-32
Identities = 61/106 (57%), Positives = 82/106 (76%), Gaps = 1/106 (0%)
Frame = -1
Query: 472 FLTHCGWNSTIESICAGVPMLCWPFVADQPTNCRYICNEWDIGIEVDTNVKREEVENLIH 293
FLTH GWNST+ES+ GVPM+CWPF A+Q TNC+Y C+EW++G+E+ +V+REEVE L+
Sbjct: 202 FLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGGDVRREEVEELVR 261
Query: 292 ELMVGDKGKKMRQRTMELKKKAEEDTRP-GGCSYMNLDKLIKEVLL 158
ELM GDKGKKMRQ+ E ++ AEE T+P G S +N ++ +VLL
Sbjct: 262 ELMDGDKGKKMRQKAEEWQRLAEEATKPIYGSSELNFQMVVDKVLL 307
>pir||F86356 T16E15.2 protein - Arabidopsis thaliana
gi|9392678|gb|AAF87255.1|AC068562_2 Strong similarity to
UDP-glucose glucosyltransferase from Arabidopsis
thaliana gb|AB016819 and contains a UDP-glucosyl
transferase PF|00201 domain. ESTs gb|U74128,
gb|AA713257 come from this gene
Length = 479
Score = 137 bits (344), Expect = 7e-32
Identities = 61/106 (57%), Positives = 82/106 (76%), Gaps = 1/106 (0%)
Frame = -1
Query: 472 FLTHCGWNSTIESICAGVPMLCWPFVADQPTNCRYICNEWDIGIEVDTNVKREEVENLIH 293
FLTH GWNST+ES+ GVPM+CWPF A+Q TNC+Y C+EW++G+E+ +V+REEVE L+
Sbjct: 372 FLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGGDVRREEVEELVR 431
Query: 292 ELMVGDKGKKMRQRTMELKKKAEEDTRP-GGCSYMNLDKLIKEVLL 158
ELM GDKGKKMRQ+ E ++ AEE T+P G S +N ++ +VLL
Sbjct: 432 ELMDGDKGKKMRQKAEEWQRLAEEATKPIYGSSELNFQMVVDKVLL 477
>pir||G86356 hypothetical protein T16E15.1 - Arabidopsis thaliana
gi|9392677|gb|AAF87254.1|AC068562_1 Strong similarity to
UDP-glucose glucosyltransferase from Arabidopsis
thaliana gb|AB016819 and contains a UDP-glucosyl
transferase PF|00201 domain. This gene is cut off
Length = 170
Score = 135 bits (340), Expect = 2e-31
Identities = 58/106 (54%), Positives = 84/106 (78%), Gaps = 1/106 (0%)
Frame = -1
Query: 472 FLTHCGWNSTIESICAGVPMLCWPFVADQPTNCRYICNEWDIGIEVDTNVKREEVENLIH 293
FLTHCGWNST+ES+ GVPM+CWPF A+Q TNC++ C+EW++GIE+ +VKR EVE ++
Sbjct: 59 FLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGIEIGGDVKRGEVEAVVR 118
Query: 292 ELMVGDKGKKMRQRTMELKKKAEEDTR-PGGCSYMNLDKLIKEVLL 158
ELM G+KGKKMR++ +E ++ AE+ T+ P G S +N + ++ +VLL
Sbjct: 119 ELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFETIVNKVLL 164
>pir||T06371 probable UDP-glucuronosyltransferase (EC 2.4.1.-) - garden pea
gi|2827992|gb|AAB99950.1| UDP-glucuronosyltransferase
[Pisum sativum]
Length = 347
Score = 134 bits (336), Expect = 6e-31
Identities = 56/106 (52%), Positives = 85/106 (79%), Gaps = 1/106 (0%)
Frame = -1
Query: 472 FLTHCGWNSTIESICAGVPMLCWPFVADQPTNCRYICNEWDIGIEVDTNVKREEVENLIH 293
FLTH GWNST+ES+C GVPM+CWPF A+Q TNCR+ C+EW IG+E++ + KR+++E+L+
Sbjct: 243 FLTHSGWNSTLESVCGGVPMICWPFFAEQQTNCRFCCHEWGIGLEIE-DAKRDKIESLVK 301
Query: 292 ELMVGDKGKKMRQRTMELKKKA-EEDTRPGGCSYMNLDKLIKEVLL 158
E++ G+KGK+M+++ +E KK A + P G S+MNL+K+ ++VLL
Sbjct: 302 EMVEGEKGKEMKEKALEWKKLAPNAASGPNGSSFMNLEKMFRDVLL 347
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 422,679,812
Number of Sequences: 1393205
Number of extensions: 8951319
Number of successful extensions: 29372
Number of sequences better than 10.0: 655
Number of HSP's better than 10.0 without gapping: 28423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29248
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12524054526
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
