>KMC004502A_C02 KMC004502A_c02
tggaaacatctgacagcagcagcaaatttatacactgTATAACTCAATGCATACCACACA
TCCTATAATTTGAATCGAACATAAGACAAAAAGGTACACAAAAAATACAAACAGACTTGG
TGTACCATGAACGTAATTATCACATGTCTACATTTATCATTTATTTGATAGCAGAGGAGA
GTGAAAAGAGGCATATAGTTATCAATTTTTTGCTGAGGTACAGCCAAGGAATAAATAACA
GCAATAAAGCTACAAAGAAATTTTAACAGATGAATAAGGGCAAAATAGAGACCAGGTAGT
GTTTGCAAGATGTTAGTCATAAACGTATCCAAGTTATCGGATCAAGATGCCGACACACTA
AAACATTCATCGCTGCATTAGAAGTGGGAAACCAATTAGAAAGATTTGATTCCCCTCCTG
TAGCATAAGTTCAATGAGTTCCATGACCATGAGAACCTCAAATCAACGCACGGTATTGGA
GAAGGCGCAAAGTGATGAGAGCTTCAAGGACACCAAAGCAAGCTCCAAAGAGGACATCGA
GAATGTAATGCCTCCCAAGAACAACCCTAGAAACAACGGTCGTCAGAGCCCAGGACCAGA
CCGGCGCAACCAACAGATTAACAGCCAAAAC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004502A_C02 KMC004502A_c02
         (631 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_193986.1| putative protein; protein id: At4g22550.1 [Arab...    62  8e-09
gb|AAG49895.1| PnFL-1 [Ipomoea nil]                                    56  4e-07
ref|NP_723543.1| CG31717-PA [Drosophila melanogaster] gi|1844710...    52  8e-06
pir||T16869 hypothetical protein T13C5.6 - Caenorhabditis elegans      41  0.011
ref|NP_509040.2| PAP2 superfamily [Caenorhabditis elegans] gi|20...    41  0.011

>ref|NP_193986.1| putative protein; protein id: At4g22550.1 [Arabidopsis thaliana]
           gi|7486605|pir||T05449 hypothetical protein F7K2.130 -
           Arabidopsis thaliana gi|3892710|emb|CAA22160.1| putative
           protein [Arabidopsis thaliana]
           gi|7269101|emb|CAB79210.1| putative protein [Arabidopsis
           thaliana] gi|28973659|gb|AAO64149.1| unknown protein
           [Arabidopsis thaliana]
          Length = 213

 Score = 61.6 bits (148), Expect = 8e-09
 Identities = 27/53 (50%), Positives = 37/53 (68%)
 Frame = -1

Query: 613 LVAPVWSWALTTVVSRVVLGRHYILDVLFGACFGVLEALITLRLLQYRALI*G 455
           +V  VW WA  T +SR++LGRHY+LDV  GA  G++EAL  LR L++  +I G
Sbjct: 160 VVVVVWIWATVTAISRILLGRHYVLDVAAGAFLGIVEALFALRFLRFDEMIFG 212

>gb|AAG49895.1| PnFL-1 [Ipomoea nil]
          Length = 209

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = -1

Query: 601 VWSWALTTVVSRVVLGRHYILDVLFGACFGVLEALITLRLLQYRAL 464
           + +WA  T VSR++LGRH++LDV+ GAC GVLE L + R   Y  L
Sbjct: 159 IGAWATITSVSRILLGRHFVLDVVAGACLGVLEGLFSFRFFNYDKL 204

>ref|NP_723543.1| CG31717-PA [Drosophila melanogaster] gi|18447108|gb|AAL68145.1|
           AT30094p [Drosophila melanogaster]
           gi|22946111|gb|AAN10729.1| CG31717-PA [Drosophila
           melanogaster]
          Length = 204

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 22/41 (53%), Positives = 31/41 (74%)
 Frame = -1

Query: 616 LLVAPVWSWALTTVVSRVVLGRHYILDVLFGACFGVLEALI 494
           + + PV +WA++  +SR++L RHYILD+  GA  GVLEALI
Sbjct: 137 IFLMPVTAWAVSVAISRLILQRHYILDICAGAAIGVLEALI 177

>pir||T16869 hypothetical protein T13C5.6 - Caenorhabditis elegans
          Length = 345

 Score = 41.2 bits (95), Expect = 0.011
 Identities = 23/48 (47%), Positives = 27/48 (55%)
 Frame = -1

Query: 625 AVNLLVAPVWSWALTTVVSRVVLGRHYILDVLFGACFGVLEALITLRL 482
           A  L V P   + L   +SRV LGRHYI DVL G   G LEA + L +
Sbjct: 126 AAPLYVIPFIPFPLVVGLSRVALGRHYITDVLAGIFIGYLEARLMLTI 173

>ref|NP_509040.2| PAP2 superfamily [Caenorhabditis elegans]
           gi|20198885|gb|AAM15605.1|U39648_8 Hypothetical protein
           T13C5.6 [Caenorhabditis elegans]
          Length = 186

 Score = 41.2 bits (95), Expect = 0.011
 Identities = 23/48 (47%), Positives = 27/48 (55%)
 Frame = -1

Query: 625 AVNLLVAPVWSWALTTVVSRVVLGRHYILDVLFGACFGVLEALITLRL 482
           A  L V P   + L   +SRV LGRHYI DVL G   G LEA + L +
Sbjct: 126 AAPLYVIPFIPFPLVVGLSRVALGRHYITDVLAGIFIGYLEARLMLTI 173

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 523,382,432
Number of Sequences: 1393205
Number of extensions: 11060767
Number of successful extensions: 34426
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 31685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34043
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MF076g08_f BP032339 1 483 2 MR089d07_f BP082839 96 572 3 SPD015f12_f BP045204 167 350 4 MR048e07_f BP079720 167 677

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