Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004469A_C01 KMC004469A_c01
(379 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181813.1| taxane 13 alpha-hydroxylase(cytochrome P450 fam... 113 7e-25
dbj|BAC56035.1| putative Cytochrome P450 85 (Dwarf protein) [Ory... 100 8e-21
ref|NP_198462.1| putative protein; protein id: At5g36130.1 [Arab... 94 3e-19
dbj|BAC56032.1| putative Cytochrome P450 [Oryza sativa (japonica... 94 4e-19
ref|NP_198460.1| cytochrome p450 family; protein id: At5g36110.1... 94 6e-19
>ref|NP_181813.1| taxane 13 alpha-hydroxylase(cytochrome P450 family), putative;
protein id: At2g42850.1 [Arabidopsis thaliana]
gi|25282637|pir||A84859 probable cytochrome P450
[imported] - Arabidopsis thaliana
gi|4512670|gb|AAD21724.1| putative cytochrome P450
[Arabidopsis thaliana]
Length = 485
Score = 113 bits (282), Expect = 7e-25
Identities = 50/97 (51%), Positives = 68/97 (69%)
Frame = -1
Query: 379 WAACGTHMNNEIFKNPNKFDPSRFDNPPKPIPSFSYLPFGGGLHYCLGNEFARVETLTTI 200
W GTH N EIF++P FDP+RFD KPI +++YLPFGGG C G++ A++ L +
Sbjct: 390 WTTYGTHYNPEIFQDPMSFDPTRFD---KPIQAYTYLPFGGGPRLCAGHQLAKISILVFM 446
Query: 199 HNFVTMCEWSQVNPEETITRQPMPYPSMGLPIKIKPK 89
H VT +WS V P+ETI+ P+P+PS+G+PIKI PK
Sbjct: 447 HFVVTGFDWSLVYPDETISMDPLPFPSLGMPIKISPK 483
>dbj|BAC56035.1| putative Cytochrome P450 85 (Dwarf protein) [Oryza sativa (japonica
cultivar-group)]
Length = 483
Score = 99.8 bits (247), Expect = 8e-21
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -1
Query: 364 THMNNEIFKNPNKFDPSRFDNPPKPIPSFSYLPFGGGLHYCLGNEFARVETLTTIHNFVT 185
TH++ IF P+ FDP+RF+N IP + ++PFGGG C GNEFAR ETL T+H+ VT
Sbjct: 385 THLDANIFPEPSNFDPARFENNSS-IPPYCFVPFGGGPRMCPGNEFARTETLVTMHSLVT 443
Query: 184 MCEWSQVNPEETITRQPMPYPSMGLPIKIKPKC 86
W EE+ + P P P +GLP++++P+C
Sbjct: 444 QFRWKLCCKEESYKKDPSPTPLLGLPVELEPRC 476
>ref|NP_198462.1| putative protein; protein id: At5g36130.1 [Arabidopsis thaliana]
gi|8777298|dbj|BAA96888.1| contains similarity to
cytochrome P450~gene_id:MAB16.8 [Arabidopsis thaliana]
Length = 140
Score = 94.4 bits (233), Expect = 3e-19
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = -1
Query: 379 WAACGTHMNNEIFKNPNKFDPSRFDNP-PKPIPSFSYLPFGGGLHYCLGNEFARVETLTT 203
W+A TH N E F P KF+PSRF+ PKP ++Y+PFGGG C G E+AR+E L
Sbjct: 44 WSATATHKNPEYFPEPEKFEPSRFEGSGPKP---YTYVPFGGGSRICPGREYARLEILIF 100
Query: 202 IHNFVTMCEWSQVNPEET-ITRQPMPYPSMGLPIKIKPK 89
+HN V +W +V P+E + P P P+ GLPI+I P+
Sbjct: 101 MHNLVKRFKWEKVFPKENKLVADPAPIPAKGLPIRIFPQ 139
>dbj|BAC56032.1| putative Cytochrome P450 [Oryza sativa (japonica cultivar-group)]
Length = 489
Score = 94.0 bits (232), Expect = 4e-19
Identities = 48/103 (46%), Positives = 60/103 (57%), Gaps = 6/103 (5%)
Frame = -1
Query: 379 WAACGTHMNNEIFKNPNKFDPSRFDNPP------KPIPSFSYLPFGGGLHYCLGNEFARV 218
W A THM+ IF +P+KF PSRFD+ K P SY+ FGGG C G EFAR+
Sbjct: 384 WVASVTHMDAAIFHDPDKFLPSRFDSQSSSPSTAKAAPPCSYVAFGGGPRICPGIEFARI 443
Query: 217 ETLTTIHNFVTMCEWSQVNPEETITRQPMPYPSMGLPIKIKPK 89
ETL +H+ V W E+T R PMP P GLPI+I+P+
Sbjct: 444 ETLVMMHHLVRKFRWKLCCKEDTFARDPMPTPLHGLPIEIEPR 486
>ref|NP_198460.1| cytochrome p450 family; protein id: At5g36110.1 [Arabidopsis
thaliana] gi|8777295|dbj|BAA96885.1| cytochrome
P450-like [Arabidopsis thaliana]
Length = 477
Score = 93.6 bits (231), Expect = 6e-19
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = -1
Query: 379 WAACGTHMNNEIFKNPNKFDPSRFDNP-PKPIPSFSYLPFGGGLHYCLGNEFARVETLTT 203
W+A THMN + F P +F+P+RF+ PKP ++Y+PFGGG C G E+AR+E L
Sbjct: 381 WSATATHMNPDYFPEPERFEPNRFEGSGPKP---YTYVPFGGGPRMCPGKEYARLEILIF 437
Query: 202 IHNFVTMCEWSQVNPEET-ITRQPMPYPSMGLPIKIKPK 89
+HN V +W +V P E I P+P P GLPI+I P+
Sbjct: 438 MHNLVNRFKWEKVFPNENKIVVDPLPIPDKGLPIRIFPQ 476
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 377,809,743
Number of Sequences: 1393205
Number of extensions: 8455407
Number of successful extensions: 27127
Number of sequences better than 10.0: 2035
Number of HSP's better than 10.0 without gapping: 25473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26249
length of database: 448,689,247
effective HSP length: 101
effective length of database: 307,975,542
effective search space used: 7391413008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
