Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004466A_C01 KMC004466A_c01
(532 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196824.1| ABA-responsive protein - like; protein id: At5g... 110 1e-23
dbj|BAC43153.1| unknown protein [Arabidopsis thaliana] 87 1e-16
gb|AAM64738.1| unknown [Arabidopsis thaliana] 87 1e-16
ref|NP_565538.1| Expressed protein; protein id: At2g22475.1, sup... 87 1e-16
gb|AAN64136.1| Putative FH protein interacting protein FIP1 [Ory... 86 2e-16
>ref|NP_196824.1| ABA-responsive protein - like; protein id: At5g13200.1 [Arabidopsis
thaliana] gi|11281147|pir||T48567 ABA-responsive protein
homolog T31B5.20 - Arabidopsis thaliana
gi|7529275|emb|CAB86627.1| ABA-responsive protein-like
[Arabidopsis thaliana]
Length = 272
Score = 110 bits (274), Expect = 1e-23
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = -2
Query: 531 FTAPSGQETWSYYKVMVPLGKIGAVNPVSMRENPSEKYIQIVTVDGHDFWFMGFVNYDKA 352
FTAPSGQE+WSYY+V+VPL + VNPV ++E P EKYIQ+ TVDGHDFWFMGFVNY+KA
Sbjct: 193 FTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKA 252
Query: 351 VKNLSDGISHF 319
+L +S F
Sbjct: 253 THHLLTSVSDF 263
>dbj|BAC43153.1| unknown protein [Arabidopsis thaliana]
Length = 299
Score = 87.0 bits (214), Expect = 1e-16
Identities = 36/62 (58%), Positives = 49/62 (78%)
Frame = -2
Query: 513 QETWSYYKVMVPLGKIGAVNPVSMRENPSEKYIQIVTVDGHDFWFMGFVNYDKAVKNLSD 334
Q WSYYKV++PL ++ AVNP + NP+EKYIQ+++VD H+FWFMGF+NYD AV +L D
Sbjct: 230 QTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQD 289
Query: 333 GI 328
+
Sbjct: 290 SL 291
>gb|AAM64738.1| unknown [Arabidopsis thaliana]
Length = 299
Score = 87.0 bits (214), Expect = 1e-16
Identities = 36/62 (58%), Positives = 49/62 (78%)
Frame = -2
Query: 513 QETWSYYKVMVPLGKIGAVNPVSMRENPSEKYIQIVTVDGHDFWFMGFVNYDKAVKNLSD 334
Q WSYYKV++PL ++ AVNP + NP+EKYIQ+++VD H+FWFMGF+NYD AV +L D
Sbjct: 230 QTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQD 289
Query: 333 GI 328
+
Sbjct: 290 SL 291
>ref|NP_565538.1| Expressed protein; protein id: At2g22475.1, supported by cDNA:
32573. [Arabidopsis thaliana] gi|20197888|gb|AAM15301.1|
Expressed protein [Arabidopsis thaliana]
Length = 299
Score = 87.0 bits (214), Expect = 1e-16
Identities = 36/62 (58%), Positives = 49/62 (78%)
Frame = -2
Query: 513 QETWSYYKVMVPLGKIGAVNPVSMRENPSEKYIQIVTVDGHDFWFMGFVNYDKAVKNLSD 334
Q WSYYKV++PL ++ AVNP + NP+EKYIQ+++VD H+FWFMGF+NYD AV +L D
Sbjct: 230 QTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQD 289
Query: 333 GI 328
+
Sbjct: 290 SL 291
>gb|AAN64136.1| Putative FH protein interacting protein FIP1 [Oryza sativa
(japonica cultivar-group)]
Length = 264
Score = 86.3 bits (212), Expect = 2e-16
Identities = 36/62 (58%), Positives = 49/62 (78%)
Frame = -2
Query: 513 QETWSYYKVMVPLGKIGAVNPVSMRENPSEKYIQIVTVDGHDFWFMGFVNYDKAVKNLSD 334
++ WSYYKV++P ++ +VNP + R N SEKYIQ+V+VD H+FWFMGFV YD AVKNL +
Sbjct: 195 KDEWSYYKVVIPHTQLRSVNPSTSRTNASEKYIQVVSVDNHEFWFMGFVYYDSAVKNLQE 254
Query: 333 GI 328
+
Sbjct: 255 AL 256
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 466,195,725
Number of Sequences: 1393205
Number of extensions: 10073150
Number of successful extensions: 26529
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 25383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26478
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
