Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004451A_C01 KMC004451A_c01
(652 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191142.1| putative protein; protein id: At3g55830.1 [Arab... 85 7e-16
gb|AAH44703.1| Similar to exostoses (multiple) 2 [Xenopus laevis] 32 5.7
gb|AAC32397.1| putative tumor suppressor homolog [Drosophila mel... 32 5.7
gb|EAA07205.1| ebiP148 [Anopheles gambiae str. PEST] 32 7.4
ref|NP_477231.1| tout-velu CG10117-PA gi|7303172|gb|AAF58236.1| ... 32 7.4
>ref|NP_191142.1| putative protein; protein id: At3g55830.1 [Arabidopsis thaliana]
gi|11357689|pir||T49195 hypothetical protein F27K19.10 -
Arabidopsis thaliana gi|7573478|emb|CAB87837.1| putative
protein [Arabidopsis thaliana]
Length = 334
Score = 85.1 bits (209), Expect = 7e-16
Identities = 35/67 (52%), Positives = 51/67 (75%)
Frame = -2
Query: 648 LVANATGGPPIWVKGXIYEMGASSISSLKGHSQRRNKCLNDLISLYGTLPLVPTNVKAVS 469
L+ANAT P IWVKG IYE+G++ ISS+ GH+++R C+N ++ +G +PLV T++KAV
Sbjct: 268 LIANATNAPAIWVKGKIYEIGSTGISSIGGHTEKRTHCVNRFVAEFGKMPLVYTSMKAVD 327
Query: 468 ARNEWLW 448
+RN W W
Sbjct: 328 SRNLWFW 334
>gb|AAH44703.1| Similar to exostoses (multiple) 2 [Xenopus laevis]
Length = 718
Score = 32.3 bits (72), Expect = 5.7
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 648 LVANATGGPPIWV----KGXIYEMGASSISSL-KGHSQRRNKCLNDLISLYGTLPL 496
LVAN TG PI V K E A SL + H R++C+N S++GT+PL
Sbjct: 634 LVANVTGKAPIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPL 689
>gb|AAC32397.1| putative tumor suppressor homolog [Drosophila melanogaster]
Length = 760
Score = 32.3 bits (72), Expect = 5.7
Identities = 20/61 (32%), Positives = 32/61 (51%), Gaps = 3/61 (4%)
Frame = -2
Query: 651 LLVANATGGPPIWV---KGXIYEMGASSISSLKGHSQRRNKCLNDLISLYGTLPLVPTNV 481
LLV++ T PPI V KG S + H +R CLN +++G +PL+ +N+
Sbjct: 675 LLVSHVTRKPPIKVTQRKGLQGSGDGSFAWNDPDHFIQRQSCLNTFAAVFGYMPLIRSNL 734
Query: 480 K 478
+
Sbjct: 735 R 735
>gb|EAA07205.1| ebiP148 [Anopheles gambiae str. PEST]
Length = 771
Score = 32.0 bits (71), Expect = 7.4
Identities = 20/61 (32%), Positives = 32/61 (51%), Gaps = 3/61 (4%)
Frame = -2
Query: 651 LLVANATGGPPIWV---KGXIYEMGASSISSLKGHSQRRNKCLNDLISLYGTLPLVPTNV 481
LLV++ T PPI V KG S + H +R CLN +++G +PL+ +N+
Sbjct: 686 LLVSHVTRKPPIKVTQRKGYKDRESGRSPWNDPDHFIQRQSCLNTFAAVFGYMPLLRSNL 745
Query: 480 K 478
+
Sbjct: 746 R 746
>ref|NP_477231.1| tout-velu CG10117-PA gi|7303172|gb|AAF58236.1| CG10117-PA
[Drosophila melanogaster]
Length = 760
Score = 32.0 bits (71), Expect = 7.4
Identities = 20/61 (32%), Positives = 32/61 (51%), Gaps = 3/61 (4%)
Frame = -2
Query: 651 LLVANATGGPPIWV---KGXIYEMGASSISSLKGHSQRRNKCLNDLISLYGTLPLVPTNV 481
LLV++ T PPI V KG S + H +R CLN +++G +PL+ +N+
Sbjct: 675 LLVSHVTRKPPIKVTQRKGYKDRETGRSPWNDPDHFIQRQSCLNTFAAVFGYMPLIRSNL 734
Query: 480 K 478
+
Sbjct: 735 R 735
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 545,313,356
Number of Sequences: 1393205
Number of extensions: 11652889
Number of successful extensions: 25053
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25047
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
