Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004449A_C01 KMC004449A_c01
(608 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199777.1| receptor protein kinase; protein id: At5g49660.... 142 3e-33
dbj|BAC42540.1| putative receptor protein kinase [Arabidopsis th... 142 3e-33
ref|NP_172468.2| leucine-rich repeat transmembrane protein kinas... 125 4e-28
gb|AAL12626.1| leucine-rich repeat receptor-like kinase F21M12.3... 120 1e-26
ref|NP_188604.1| receptor-like protein kinase, putative; protein... 111 8e-24
>ref|NP_199777.1| receptor protein kinase; protein id: At5g49660.1 [Arabidopsis
thaliana]
Length = 966
Score = 142 bits (359), Expect = 3e-33
Identities = 73/110 (66%), Positives = 85/110 (76%)
Frame = -2
Query: 607 LAPEYAYSPRPTTKCDVYSFGVILMELLTGKKPVGAEFGENRNIVFWVSNKVEGKDGARP 428
LAPEYAYS + T KCDVYSFGV+LMEL+TGKKPV + FGEN+NIV WVS K++ K+G
Sbjct: 832 LAPEYAYSSKATIKCDVYSFGVVLMELITGKKPVDSCFGENKNIVNWVSTKIDTKEGL-- 889
Query: 427 SEALDPRLSCSWKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEPR 278
E LD RLS S K DMI LR+AIRCT + P RPTM EVVQLLI+A P+
Sbjct: 890 IETLDKRLSESSKADMINALRVAIRCTSRTPTIRPTMNEVVQLLIDATPQ 939
>dbj|BAC42540.1| putative receptor protein kinase [Arabidopsis thaliana]
Length = 966
Score = 142 bits (359), Expect = 3e-33
Identities = 73/110 (66%), Positives = 85/110 (76%)
Frame = -2
Query: 607 LAPEYAYSPRPTTKCDVYSFGVILMELLTGKKPVGAEFGENRNIVFWVSNKVEGKDGARP 428
LAPEYAYS + T KCDVYSFGV+LMEL+TGKKPV + FGEN+NIV WVS K++ K+G
Sbjct: 832 LAPEYAYSSKATIKCDVYSFGVVLMELITGKKPVDSCFGENKNIVNWVSTKIDTKEGL-- 889
Query: 427 SEALDPRLSCSWKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEPR 278
E LD RLS S K DMI LR+AIRCT + P RPTM EVVQLLI+A P+
Sbjct: 890 IETLDKRLSESSKADMINALRVAIRCTSRTPTIRPTMNEVVQLLIDATPQ 939
>ref|NP_172468.2| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g09970.1, supported by cDNA: gi_17065207
[Arabidopsis thaliana] gi|17065208|gb|AAL32758.1| Unknown
protein [Arabidopsis thaliana]
Length = 976
Score = 125 bits (314), Expect = 4e-28
Identities = 58/109 (53%), Positives = 83/109 (75%)
Frame = -2
Query: 607 LAPEYAYSPRPTTKCDVYSFGVILMELLTGKKPVGAEFGENRNIVFWVSNKVEGKDGARP 428
+APEY Y+ + T KCDVYSFGV+LMEL+TGKKP+ AEFGE+++IV WVSN ++ K+
Sbjct: 850 IAPEYGYASKVTEKCDVYSFGVVLMELVTGKKPIEAEFGESKDIVNWVSNNLKSKESV-- 907
Query: 427 SEALDPRLSCSWKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEP 281
E +D ++ +++D +K+LRIAI CT + P RPTM+ VVQ++ +AEP
Sbjct: 908 MEIVDKKIGEMYREDAVKMLRIAIICTARLPGLRPTMRSVVQMIEDAEP 956
>gb|AAL12626.1| leucine-rich repeat receptor-like kinase F21M12.36 [Arabidopsis
thaliana]
Length = 977
Score = 120 bits (302), Expect = 1e-26
Identities = 58/110 (52%), Positives = 83/110 (74%), Gaps = 1/110 (0%)
Frame = -2
Query: 607 LAP-EYAYSPRPTTKCDVYSFGVILMELLTGKKPVGAEFGENRNIVFWVSNKVEGKDGAR 431
+AP EY Y+ + T KCDVYSFGV+LMEL+TGKKP+ AEFGE+++IV WVSN ++ K+
Sbjct: 850 IAPAEYGYASKVTEKCDVYSFGVVLMELVTGKKPIEAEFGESKDIVNWVSNNLKSKESV- 908
Query: 430 PSEALDPRLSCSWKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEP 281
E +D ++ +++D +K+LRIAI CT + P RPTM+ VVQ++ +AEP
Sbjct: 909 -MEIVDKKIGEMYREDAVKMLRIAIICTARLPGLRPTMRSVVQMIEDAEP 957
>ref|NP_188604.1| receptor-like protein kinase, putative; protein id: At3g19700.1
[Arabidopsis thaliana] gi|25456429|pir||T52400
receptor-like protein kinase [imported] - Arabidopsis
thaliana gi|9294437|dbj|BAB02557.1| receptor-like protein
kinase [Arabidopsis thaliana]
Length = 991
Score = 111 bits (277), Expect = 8e-24
Identities = 58/130 (44%), Positives = 85/130 (64%), Gaps = 1/130 (0%)
Frame = -2
Query: 607 LAPEYAYSPRPTTKCDVYSFGVILMELLTGKKPVGAEFGENRNIVFWVSNKVEGKDGARP 428
+APEYAY+ + K DVYSFGV+LMEL+TGKKP+ +FGEN +IV WV + + +
Sbjct: 860 IAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMM 919
Query: 427 SEALDPRLSCSWKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEPR-NSDSCKLST 251
+ +D + +K+D +KVL IA+ CT K+P +RP MK VV +L + EP N +S + S
Sbjct: 920 MKLIDTSIEDEYKEDALKVLTIALLCTDKSPQARPFMKSVVSMLEKIEPSYNKNSGEASY 979
Query: 250 KDASNVTIIK 221
+++N I K
Sbjct: 980 GESANDEITK 989
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 518,797,040
Number of Sequences: 1393205
Number of extensions: 11072195
Number of successful extensions: 34212
Number of sequences better than 10.0: 2555
Number of HSP's better than 10.0 without gapping: 32137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33334
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
