Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004429A_C01 KMC004429A_c01
(874 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T14278 myosin-like protein my4 - common sunflower gi|244417... 223 3e-57
gb|AAK21311.1| myosin subfamily XI heavy chain [Petroselinum cri... 218 9e-56
dbj|BAC66162.1| myosin XI [Nicotiana tabacum] 213 4e-54
ref|NP_199203.1| myosin heavy chain MYA2 (pir||S51824); protein ... 209 3e-53
ref|NP_680747.1| similar to myosin heavy chain MYA2 (pir||S51824... 205 8e-52
>pir||T14278 myosin-like protein my4 - common sunflower gi|2444178|gb|AAB71528.1|
unconventional myosin [Helianthus annuus]
Length = 1502
Score = 223 bits (568), Expect = 3e-57
Identities = 107/125 (85%), Positives = 117/125 (93%)
Frame = -3
Query: 872 WDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPD 693
WDELKHIRQAVGFLVIHQKYRISYDEIINDLCPI+SVQQLYRICTLYWD NYNTRSVSPD
Sbjct: 1378 WDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDDNYNTRSVSPD 1437
Query: 692 VLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVEDLSTAMQEKDFSDLKPAEELLENPAF 513
V+SSMR+LM EDSNNA S SFLLDD+SSIPFSV+DLS+++Q K+FSD+KPA EL ENPAF
Sbjct: 1438 VISSMRILMTEDSNNAASSSFLLDDNSSIPFSVDDLSSSLQVKEFSDVKPAVELAENPAF 1497
Query: 512 QFLTE 498
QFL E
Sbjct: 1498 QFLHE 1502
>gb|AAK21311.1| myosin subfamily XI heavy chain [Petroselinum crispum]
Length = 1515
Score = 218 bits (555), Expect = 9e-56
Identities = 105/125 (84%), Positives = 117/125 (93%)
Frame = -3
Query: 872 WDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPD 693
WDELKHIRQ+VGFLVIHQKYRISYDEIINDLCPI+SVQQLYRICTLYWD NYNTRSVSPD
Sbjct: 1391 WDELKHIRQSVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDDNYNTRSVSPD 1450
Query: 692 VLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVEDLSTAMQEKDFSDLKPAEELLENPAF 513
V+SSMR+LM EDSN+A S+SFLLDD+SSIPFSVEDLS+++Q KDF D+KPA +LLEN AF
Sbjct: 1451 VISSMRILMTEDSNSAASNSFLLDDNSSIPFSVEDLSSSLQVKDFLDVKPATDLLENLAF 1510
Query: 512 QFLTE 498
QFL E
Sbjct: 1511 QFLHE 1515
>dbj|BAC66162.1| myosin XI [Nicotiana tabacum]
Length = 1362
Score = 213 bits (541), Expect = 4e-54
Identities = 102/125 (81%), Positives = 116/125 (92%)
Frame = -3
Query: 872 WDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPD 693
WDELKHIRQAVGFLVIHQKYRISYDEI NDLCPI+SVQQLYRICTLY D NYNTRSVSPD
Sbjct: 1238 WDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYGDDNYNTRSVSPD 1297
Query: 692 VLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVEDLSTAMQEKDFSDLKPAEELLENPAF 513
V+SSMRVLM EDSNNA+S+SFLLDD+SSIPFS++++S ++Q KDF+D+K A +LLENPAF
Sbjct: 1298 VISSMRVLMTEDSNNAESNSFLLDDNSSIPFSIDEVSESLQVKDFADVKAATQLLENPAF 1357
Query: 512 QFLTE 498
QFL E
Sbjct: 1358 QFLHE 1362
>ref|NP_199203.1| myosin heavy chain MYA2 (pir||S51824); protein id: At5g43900.1
[Arabidopsis thaliana] gi|8953751|dbj|BAA98070.1| myosin
heavy chain MYA2 [Arabidopsis thaliana]
Length = 1505
Score = 209 bits (533), Expect = 3e-53
Identities = 98/123 (79%), Positives = 113/123 (91%)
Frame = -3
Query: 872 WDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPD 693
W+ELKHIRQAVGFLVIHQKYRISYDEI NDLCP++SVQQLYRICTLYWD +YNTRSVS +
Sbjct: 1382 WEELKHIRQAVGFLVIHQKYRISYDEIANDLCPVLSVQQLYRICTLYWDDSYNTRSVSQE 1441
Query: 692 VLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVEDLSTAMQEKDFSDLKPAEELLENPAF 513
V+SSMR LM E+SN+A SDSFLLDD SSIPFS++D+S++M+EKDF +KPAEELLENPAF
Sbjct: 1442 VISSMRTLMTEESNDADSDSFLLDDDSSIPFSIDDISSSMEEKDFVGIKPAEELLENPAF 1501
Query: 512 QFL 504
FL
Sbjct: 1502 VFL 1504
>ref|NP_680747.1| similar to myosin heavy chain MYA2 (pir||S51824); protein id:
At4g28715.1 [Arabidopsis thaliana]
Length = 639
Score = 205 bits (521), Expect = 8e-52
Identities = 95/123 (77%), Positives = 113/123 (91%)
Frame = -3
Query: 872 WDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPD 693
WDELKHIRQAVGF+VIH+KYRISYD+I +DLCPI+SVQQLYRICTLYWD +YNTRSVS D
Sbjct: 516 WDELKHIRQAVGFMVIHKKYRISYDDIAHDLCPILSVQQLYRICTLYWDDSYNTRSVSQD 575
Query: 692 VLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVEDLSTAMQEKDFSDLKPAEELLENPAF 513
V+++MRVLM EDSNNA S +FLLD+ SSIPFS +DLS++M+EKDF+++KPAEEL ENPAF
Sbjct: 576 VIANMRVLMTEDSNNADSSAFLLDEDSSIPFSADDLSSSMKEKDFAEMKPAEELEENPAF 635
Query: 512 QFL 504
FL
Sbjct: 636 SFL 638
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 753,710,697
Number of Sequences: 1393205
Number of extensions: 16829658
Number of successful extensions: 45107
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 42634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44876
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 46824663816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
