Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004394A_C01 KMC004394A_c01
(889 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM29152.1| plastidic ATP/ADP transporter [Citrus hybrid cult... 343 2e-93
sp|O24381|TLC1_SOLTU PLASTIDIC ATP/ADP-TRANSPORTER gi|7441708|pi... 343 3e-93
emb|CAA89201.2| adenine nucleotide translocase [Arabidopsis thal... 337 2e-91
gb|AAK76577.1| putative adenine nucleotide translocase [Arabidop... 337 2e-91
ref|NP_178146.1| adenine nucleotide translocase; protein id: At1... 337 2e-91
>gb|AAM29152.1| plastidic ATP/ADP transporter [Citrus hybrid cultivar]
Length = 588
Score = 343 bits (881), Expect = 2e-93
Identities = 172/194 (88%), Positives = 186/194 (95%)
Frame = -3
Query: 887 GIATFIMMLLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPL 708
GIATF MMLLSQF+FDK+GWGVAA ITPTVLLLTGVGFFSL+LFG P+ P LA+FGMTPL
Sbjct: 386 GIATFTMMLLSQFIFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPL 445
Query: 707 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 528
LAAVYVGA+QNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI
Sbjct: 446 LAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 505
Query: 527 QQFMILSFGSLANSTPYLGGVLLVIVLAWLAAARSLDTQFTALRREEEIEKEMERVASVK 348
QQFMIL+FGSLANSTPYLGG+LLVIVLAWL AARSLDTQFTALR+EEE+EKEMER A+VK
Sbjct: 506 QQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQEEELEKEMER-AAVK 564
Query: 347 IPVVAENKDGNGSL 306
IPVV+EN+ GNG+L
Sbjct: 565 IPVVSENEGGNGTL 578
>sp|O24381|TLC1_SOLTU PLASTIDIC ATP/ADP-TRANSPORTER gi|7441708|pir||T07420
ATP/ADP-transporter, chloroplast - potato
gi|4138583|emb|CAA71785.1| plastidic ATP/ADP-transporter
[Solanum tuberosum]
Length = 631
Score = 343 bits (879), Expect = 3e-93
Identities = 176/219 (80%), Positives = 198/219 (90%), Gaps = 4/219 (1%)
Frame = -3
Query: 887 GIATFIMMLLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPL 708
GIATF MMLLSQ++FDKYGWG AA ITPTVLLLTGVGFFSL+LFG P+AP LA+FGMTPL
Sbjct: 413 GIATFTMMLLSQWIFDKYGWGAAAKITPTVLLLTGVGFFSLLLFGAPLAPTLAKFGMTPL 472
Query: 707 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 528
LAAVYVGA+QNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI
Sbjct: 473 LAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 532
Query: 527 QQFMILSFGSLANSTPYLGGVLLVIVLAWLAAARSLDTQFTALRREEEIEKEMERVASVK 348
QQFMIL+FGSLA+STPYLGGVLLVIVLAWL AA+SLD QFT LR+EE++EKEMER AS+K
Sbjct: 533 QQFMILTFGSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKEMER-ASLK 591
Query: 347 IPVVAENKDGNGSLASAST----AGDSSISPSEASTSSS 243
IPVV++N++GNG L+S S+ GDS+ + SE S+ S
Sbjct: 592 IPVVSQNENGNGPLSSESSLNPAGGDSTNASSEPSSPRS 630
>emb|CAA89201.2| adenine nucleotide translocase [Arabidopsis thaliana]
Length = 623
Score = 337 bits (863), Expect = 2e-91
Identities = 167/208 (80%), Positives = 188/208 (90%)
Frame = -3
Query: 887 GIATFIMMLLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPL 708
G+ATF MMLLSQ+VF+KYGWGVAA ITPTVLLLTGV FFSLILFGGP AP++A+ GMTPL
Sbjct: 414 GVATFTMMLLSQYVFNKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPL 473
Query: 707 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 528
LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI
Sbjct: 474 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 533
Query: 527 QQFMILSFGSLANSTPYLGGVLLVIVLAWLAAARSLDTQFTALRREEEIEKEMERVASVK 348
QQFMILSFGSLANSTPYLG +LLVIV AWLAAA+SL+ QF +LR EEE+EKEMER +SVK
Sbjct: 534 QQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVK 593
Query: 347 IPVVAENKDGNGSLASASTAGDSSISPS 264
IPVV++++ GNGSL + ++ +P+
Sbjct: 594 IPVVSQDESGNGSLGESPSSSPEKSAPT 621
>gb|AAK76577.1| putative adenine nucleotide translocase [Arabidopsis thaliana]
Length = 624
Score = 337 bits (863), Expect = 2e-91
Identities = 167/208 (80%), Positives = 188/208 (90%)
Frame = -3
Query: 887 GIATFIMMLLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPL 708
G+ATF MMLLSQ+VF+KYGWGVAA ITPTVLLLTGV FFSLILFGGP AP++A+ GMTPL
Sbjct: 415 GVATFTMMLLSQYVFNKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPL 474
Query: 707 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 528
LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI
Sbjct: 475 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 534
Query: 527 QQFMILSFGSLANSTPYLGGVLLVIVLAWLAAARSLDTQFTALRREEEIEKEMERVASVK 348
QQFMILSFGSLANSTPYLG +LLVIV AWLAAA+SL+ QF +LR EEE+EKEMER +SVK
Sbjct: 535 QQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVK 594
Query: 347 IPVVAENKDGNGSLASASTAGDSSISPS 264
IPVV++++ GNGSL + ++ +P+
Sbjct: 595 IPVVSQDESGNGSLGESPSSSPEKSAPT 622
>ref|NP_178146.1| adenine nucleotide translocase; protein id: At1g80300.1, supported by
cDNA: gi_15028092, supported by cDNA: gi_16226733
[Arabidopsis thaliana] gi|21264532|sp|Q39002|TLC1_ARATH
Chloroplast ADP,ATP carrier protein 1, chloroplast
precursor (ADP/ATP translocase 1) (Adenine nucleotide
translocase 1) gi|25295860|pir||E96834 adenine nucleotide
translocase, 19474-21800 [imported] - Arabidopsis
thaliana gi|12324978|gb|AAG52434.1|AC018848_5 adenine
nucleotide translocase; 19474-21800 [Arabidopsis
thaliana] gi|16226734|gb|AAL16246.1|AF428316_1
At1g80300/F5I6_5 [Arabidopsis thaliana]
Length = 624
Score = 337 bits (863), Expect = 2e-91
Identities = 167/208 (80%), Positives = 188/208 (90%)
Frame = -3
Query: 887 GIATFIMMLLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPL 708
G+ATF MMLLSQ+VF+KYGWGVAA ITPTVLLLTGV FFSLILFGGP AP++A+ GMTPL
Sbjct: 415 GVATFTMMLLSQYVFNKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPL 474
Query: 707 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 528
LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI
Sbjct: 475 LAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALI 534
Query: 527 QQFMILSFGSLANSTPYLGGVLLVIVLAWLAAARSLDTQFTALRREEEIEKEMERVASVK 348
QQFMILSFGSLANSTPYLG +LLVIV AWLAAA+SL+ QF +LR EEE+EKEMER +SVK
Sbjct: 535 QQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVK 594
Query: 347 IPVVAENKDGNGSLASASTAGDSSISPS 264
IPVV++++ GNGSL + ++ +P+
Sbjct: 595 IPVVSQDESGNGSLGESPSSSPEKSAPT 622
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 761,737,125
Number of Sequences: 1393205
Number of extensions: 17253236
Number of successful extensions: 51575
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 48447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51436
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 48218255001
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
