Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004389A_C01 KMC004389A_c01
(510 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB85362.1| P0519D04.21 [Oryza sativa (japonica cultivar-gro... 139 1e-32
ref|NP_177867.1| lysophospholipase isolog, putative; protein id:... 120 1e-26
gb|AAM60954.1| lysophospholipase isolog, putative [Arabidopsis t... 120 1e-26
pir||T51482 lipase-like protein - Arabidopsis thaliana gi|975582... 113 1e-24
ref|NP_568327.1| lipase-like protein; protein id: At5g16120.1, s... 113 1e-24
>dbj|BAB85362.1| P0519D04.21 [Oryza sativa (japonica cultivar-group)]
Length = 294
Score = 139 bits (351), Expect = 1e-32
Identities = 66/90 (73%), Positives = 77/90 (85%)
Frame = -2
Query: 509 RLKTGMELLSATQDIESQLQKVSAPLLILHGAEDKVTDPLVSQFLYEKASSKDKTLKIYE 330
RL+T +ELL AT+DIESQL+K+ +PLLILHGA D VTDP VS+FLYEKAS+KDKTLK+YE
Sbjct: 205 RLRTAVELLKATKDIESQLEKICSPLLILHGAADLVTDPHVSEFLYEKASTKDKTLKLYE 264
Query: 329 EGYHGIMEGEPDDRIFAVHNDIISWLDFRC 240
+GYH I+EGEPDDRI NDIISWLD C
Sbjct: 265 DGYHSILEGEPDDRISTAINDIISWLDSHC 294
>ref|NP_177867.1| lysophospholipase isolog, putative; protein id: At1g77420.1,
supported by cDNA: 105948. [Arabidopsis thaliana]
gi|25406502|pir||E96803 probable lipase, 4162-5963
[imported] - Arabidopsis thaliana
gi|11079483|gb|AAG29195.1|AC078898_5 lysophospholipase
isolog, putative [Arabidopsis thaliana]
gi|12323393|gb|AAG51674.1|AC010704_18 putative lipase;
4162-5963 [Arabidopsis thaliana]
gi|26452792|dbj|BAC43476.1| putative lipase [Arabidopsis
thaliana] gi|28973023|gb|AAO63836.1| putative
lysophospholipase isolog [Arabidopsis thaliana]
Length = 382
Score = 120 bits (300), Expect = 1e-26
Identities = 58/89 (65%), Positives = 72/89 (80%)
Frame = -2
Query: 509 RLKTGMELLSATQDIESQLQKVSAPLLILHGAEDKVTDPLVSQFLYEKASSKDKTLKIYE 330
RLKT +ELL+AT+DIE Q+ KVS PLLILHG DKVTDP VS+FL++ A S+DKTLK+Y
Sbjct: 290 RLKTAVELLNATRDIEMQVDKVSLPLLILHGDTDKVTDPTVSKFLHKHAVSQDKTLKLYP 349
Query: 329 EGYHGIMEGEPDDRIFAVHNDIISWLDFR 243
GYH I+EG+ D+ IF V NDI++WLD R
Sbjct: 350 GGYHCILEGDTDENIFTVINDIVAWLDAR 378
>gb|AAM60954.1| lysophospholipase isolog, putative [Arabidopsis thaliana]
Length = 382
Score = 120 bits (300), Expect = 1e-26
Identities = 58/89 (65%), Positives = 72/89 (80%)
Frame = -2
Query: 509 RLKTGMELLSATQDIESQLQKVSAPLLILHGAEDKVTDPLVSQFLYEKASSKDKTLKIYE 330
RLKT +ELL+AT+DIE Q+ KVS PLLILHG DKVTDP VS+FL++ A S+DKTLK+Y
Sbjct: 290 RLKTAVELLNATRDIEMQVDKVSLPLLILHGDTDKVTDPTVSKFLHKHAVSQDKTLKLYP 349
Query: 329 EGYHGIMEGEPDDRIFAVHNDIISWLDFR 243
GYH I+EG+ D+ IF V NDI++WLD R
Sbjct: 350 GGYHCILEGDTDENIFTVINDIVAWLDAR 378
>pir||T51482 lipase-like protein - Arabidopsis thaliana
gi|9755822|emb|CAC01853.1| lipase-like protein
[Arabidopsis thaliana]
Length = 340
Score = 113 bits (282), Expect = 1e-24
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = -2
Query: 509 RLKTGMELLSATQDIESQLQKVSAPLLILHGAEDKVTDPLVSQFLYEKASSKDKTLKIYE 330
RL+T +E+L TQDIE QLQ+VS P+LILHG D VTDP VS+ LYEKA S DK + +YE
Sbjct: 240 RLRTAVEMLRTTQDIEKQLQEVSLPILILHGEADTVTDPSVSRELYEKAKSPDKKIVLYE 299
Query: 329 EGYHGIMEGEPDDRIFAVHNDIISWLD 249
YH ++EGEPDD I V +DIISWL+
Sbjct: 300 NAYHSLLEGEPDDMILRVLSDIISWLN 326
>ref|NP_568327.1| lipase-like protein; protein id: At5g16120.1, supported by cDNA:
gi_13430613, supported by cDNA: gi_15293170 [Arabidopsis
thaliana] gi|13430614|gb|AAK25929.1|AF360219_1 putative
lipase [Arabidopsis thaliana] gi|15293171|gb|AAK93696.1|
putative lipase [Arabidopsis thaliana]
Length = 351
Score = 113 bits (282), Expect = 1e-24
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = -2
Query: 509 RLKTGMELLSATQDIESQLQKVSAPLLILHGAEDKVTDPLVSQFLYEKASSKDKTLKIYE 330
RL+T +E+L TQDIE QLQ+VS P+LILHG D VTDP VS+ LYEKA S DK + +YE
Sbjct: 251 RLRTAVEMLRTTQDIEKQLQEVSLPILILHGEADTVTDPSVSRELYEKAKSPDKKIVLYE 310
Query: 329 EGYHGIMEGEPDDRIFAVHNDIISWLD 249
YH ++EGEPDD I V +DIISWL+
Sbjct: 311 NAYHSLLEGEPDDMILRVLSDIISWLN 337
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 402,497,553
Number of Sequences: 1393205
Number of extensions: 7676572
Number of successful extensions: 16257
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 15974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16251
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
