Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004388A_C01 KMC004388A_c01
(1115 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM61087.1| unknown [Arabidopsis thaliana] 209 5e-53
ref|NP_197469.1| putative protein; protein id: At5g19680.1, supp... 209 8e-53
gb|AAB82534.1| PprA [Dictyostelium discoideum] 108 1e-22
ref|NP_002703.1| protein phosphatase 1, regulatory subunit 7; sd... 106 6e-22
gb|AAD26610.1| protein phosphatase-1 regulatory subunit 7 alpha2... 106 6e-22
>gb|AAM61087.1| unknown [Arabidopsis thaliana]
Length = 328
Score = 209 bits (533), Expect = 5e-53
Identities = 102/127 (80%), Positives = 116/127 (91%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
+SLQSNRLTSM G E C+ALEELYLSHNGI+KMEGLS+LVNLRVLDVS+NKLTSVDDIQN
Sbjct: 202 ISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLSALVNLRVLDVSNNKLTSVDDIQN 261
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAILREIFPNIQQ 756
LT+LEDLWLNDNQI+SLE EAV GS EKLTTIYLENNPCAK S+Y A +R+IFPN++Q
Sbjct: 262 LTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENNPCAKSSDYVAAVRQIFPNVEQ 321
Query: 755 IDSNVFS 735
IDSN+F+
Sbjct: 322 IDSNIFA 328
Score = 66.2 bits (160), Expect = 9e-10
Identities = 38/128 (29%), Positives = 71/128 (54%), Gaps = 22/128 (17%)
Frame = -1
Query: 1100 NRLTSMTGL-EGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQNLTQL 924
N +TS+ G+ + L+ELY+S N + K+ + L NL++L++ SN+L +++++N T+L
Sbjct: 119 NEITSLEGISKASSTLKELYVSKNEVNKIMEIEHLHNLQILELGSNRLRVMENLENFTKL 178
Query: 923 EDLW---------------------LNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAK 807
E+LW L N++ S++GF+E VA L +YL +N +K
Sbjct: 179 EELWLGRNRIKVVNLCGLKCIKKISLQSNRLTSMKGFEECVA-----LEELYLSHNGISK 233
Query: 806 LSNYAAIL 783
+ +A++
Sbjct: 234 MEGLSALV 241
Score = 38.5 bits (88), Expect = 0.19
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = -1
Query: 1058 LEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQNLTQ-LEDLWLNDNQIDSL 885
LEEL L N + K+ +S L V D+S N++TS++ I + L++L+++ N+++ +
Sbjct: 89 LEELVLRDNKLAKVPDVSIFTKLLVYDISFNEITSLEGISKASSTLKELYVSKNEVNKI 147
Score = 37.4 bits (85), Expect = 0.43
Identities = 38/113 (33%), Positives = 58/113 (50%), Gaps = 9/113 (7%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIA----LEELYLSHNGI--TKMEGLS---SLVNLRVLDVSSNK 963
L L +NRL+ GL+ IA L++L L N I + +E LS +L +L L + NK
Sbjct: 42 LDLTANRLS---GLDSRIAQLSTLKKLSLRQNLIDDSAVEPLSHWDALSDLEELVLRDNK 98
Query: 962 LTSVDDIQNLTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKL 804
L V D+ T+L ++ N+I SLEG +A + L +Y+ N K+
Sbjct: 99 LAKVPDVSIFTKLLVYDISFNEITSLEGISKA----SSTLKELYVSKNEVNKI 147
>ref|NP_197469.1| putative protein; protein id: At5g19680.1, supported by cDNA: 110392.
[Arabidopsis thaliana] gi|27808582|gb|AAO24571.1|
At5g19680 [Arabidopsis thaliana]
Length = 328
Score = 209 bits (531), Expect = 8e-53
Identities = 102/127 (80%), Positives = 116/127 (91%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
+SLQSNRLTSM G E C+ALEELYLSHNGI+KMEGLS+LVNLRVLDVS+NKLTSVDDIQN
Sbjct: 202 ISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLSALVNLRVLDVSNNKLTSVDDIQN 261
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAILREIFPNIQQ 756
LT+LEDLWLNDNQI+SLE EAV GS EKLTTIYLENNPCAK S+Y A +R+IFPN++Q
Sbjct: 262 LTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENNPCAKSSDYVAAVRQIFPNVEQ 321
Query: 755 IDSNVFS 735
IDSN+F+
Sbjct: 322 IDSNLFA 328
Score = 66.2 bits (160), Expect = 9e-10
Identities = 38/128 (29%), Positives = 71/128 (54%), Gaps = 22/128 (17%)
Frame = -1
Query: 1100 NRLTSMTGL-EGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQNLTQL 924
N +TS+ G+ + L+ELY+S N + K+ + L NL++L++ SN+L +++++N T+L
Sbjct: 119 NEITSLEGISKASSTLKELYVSKNEVNKIMEIEHLHNLQILELGSNRLRVMENLENFTKL 178
Query: 923 EDLW---------------------LNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAK 807
E+LW L N++ S++GF+E VA L +YL +N +K
Sbjct: 179 EELWLGRNRIKVVNLCGLKCIKKISLQSNRLTSMKGFEECVA-----LEELYLSHNGISK 233
Query: 806 LSNYAAIL 783
+ +A++
Sbjct: 234 MEGLSALV 241
Score = 38.5 bits (88), Expect = 0.19
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = -1
Query: 1058 LEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQNLTQ-LEDLWLNDNQIDSL 885
LEEL L N + K+ +S L V D+S N++TS++ I + L++L+++ N+++ +
Sbjct: 89 LEELVLRDNKLAKVPDVSIFTKLLVYDISFNEITSLEGISKASSTLKELYVSKNEVNKI 147
Score = 37.4 bits (85), Expect = 0.43
Identities = 38/113 (33%), Positives = 58/113 (50%), Gaps = 9/113 (7%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIA----LEELYLSHNGI--TKMEGLS---SLVNLRVLDVSSNK 963
L L +NRL+ GL+ IA L++L L N I + +E LS +L +L L + NK
Sbjct: 42 LDLTANRLS---GLDSRIAQLSTLKKLSLRQNLIDDSAVEPLSHWDALSDLEELVLRDNK 98
Query: 962 LTSVDDIQNLTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKL 804
L V D+ T+L ++ N+I SLEG +A + L +Y+ N K+
Sbjct: 99 LAKVPDVSIFTKLLVYDISFNEITSLEGISKA----SSTLKELYVSKNEVNKI 147
>gb|AAB82534.1| PprA [Dictyostelium discoideum]
Length = 154
Score = 108 bits (271), Expect = 1e-22
Identities = 55/127 (43%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
Frame = -1
Query: 1115 LSLQSNRLTSM--TGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDI 942
LSLQSNRLT + GL G LEELYLSHNGIT ++GL SL LR LD+S+NK+ ++ +
Sbjct: 27 LSLQSNRLTEIGVKGLVGLNCLEELYLSHNGITDIDGLQSLKQLRTLDISANKIKTLVGL 86
Query: 941 QNLTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAILREIFPNI 762
L L+++W NDN +DS++ ++ V T+ + +Y E NP A Y + +FP +
Sbjct: 87 NELPDLDEIWCNDNLVDSMDNIEQQV---TKSIKCLYFERNPVATHVQYRRMFINMFPQL 143
Query: 761 QQIDSNV 741
+Q+D+ +
Sbjct: 144 KQLDATM 150
>ref|NP_002703.1| protein phosphatase 1, regulatory subunit 7; sds22 [Homo sapiens]
gi|2136139|pir||S68209 sds22 protein homolog - human
gi|1085028|emb|CAA90626.1| yeast sds22 homolog [Homo
sapiens] gi|4633067|gb|AAD26611.1| protein phosphatase-1
regulatory subunit 7 alpha1 [Homo sapiens]
gi|12654185|gb|AAH00910.1|AAH00910 protein phosphatase 1,
regulatory subunit 7 [Homo sapiens]
gi|1585165|prf||2124310A sds22 gene
Length = 360
Score = 106 bits (265), Expect = 6e-22
Identities = 52/123 (42%), Positives = 79/123 (63%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
LS+QSNRLT + GL+ + L ELYLSHNGI +EGL + L +LD++SN++ +++I +
Sbjct: 235 LSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAILREIFPNIQQ 756
LT+L++ W+NDN ++S DE L T+YLE NP K Y + P+++Q
Sbjct: 295 LTELQEFWMNDNLLESWSDLDE--LKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQ 352
Query: 755 IDS 747
ID+
Sbjct: 353 IDA 355
Score = 77.4 bits (189), Expect = 4e-13
Identities = 43/125 (34%), Positives = 74/125 (58%), Gaps = 2/125 (1%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
L L SNR+ ++ ++ LE L+L N ITK++ L +L NL VL + SN+LT ++ +QN
Sbjct: 191 LELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQN 250
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAI--LREIFPNI 762
L L +L+L+ N I+ +EG + + KLT + + +N K+ N + + L+E + N
Sbjct: 251 LVNLRELYLSHNGIEVIEGLE-----NNNKLTMLDIASNRIKKIENISHLTELQEFWMND 305
Query: 761 QQIDS 747
++S
Sbjct: 306 NLLES 310
Score = 58.5 bits (140), Expect = 2e-07
Identities = 34/110 (30%), Positives = 59/110 (52%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
L L N++ + LE LE L +S N + +EG+ L L+ L + +NK++ ++++ N
Sbjct: 125 LDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSN 184
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAI 786
L QL+ L L N+I ++E D + L +++L N KL N A+
Sbjct: 185 LHQLQMLELGSNRIRAIENID-----TLTNLESLFLGKNKITKLQNLDAL 229
Score = 40.4 bits (93), Expect = 0.051
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Frame = -1
Query: 1055 EELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQNLTQLEDLWLNDNQIDSLEGF 876
E++ L+H I K+EG L ++ L + N + +++++ L L +L L DNQI +E
Sbjct: 79 EDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENL 138
Query: 875 DEAV-----------------AGSTEKLTTIYLENNPCAKLSN 798
+ +L ++L NN +K+ N
Sbjct: 139 EALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIEN 181
>gb|AAD26610.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Homo sapiens]
Length = 317
Score = 106 bits (265), Expect = 6e-22
Identities = 52/123 (42%), Positives = 79/123 (63%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
LS+QSNRLT + GL+ + L ELYLSHNGI +EGL + L +LD++SN++ +++I +
Sbjct: 192 LSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 251
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAILREIFPNIQQ 756
LT+L++ W+NDN ++S DE L T+YLE NP K Y + P+++Q
Sbjct: 252 LTELQEFWMNDNLLESWSDLDE--LKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQ 309
Query: 755 IDS 747
ID+
Sbjct: 310 IDA 312
Score = 77.4 bits (189), Expect = 4e-13
Identities = 43/125 (34%), Positives = 74/125 (58%), Gaps = 2/125 (1%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
L L SNR+ ++ ++ LE L+L N ITK++ L +L NL VL + SN+LT ++ +QN
Sbjct: 148 LELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQN 207
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAI--LREIFPNI 762
L L +L+L+ N I+ +EG + + KLT + + +N K+ N + + L+E + N
Sbjct: 208 LVNLRELYLSHNGIEVIEGLE-----NNNKLTMLDIASNRIKKIENISHLTELQEFWMND 262
Query: 761 QQIDS 747
++S
Sbjct: 263 NLLES 267
Score = 58.5 bits (140), Expect = 2e-07
Identities = 34/110 (30%), Positives = 59/110 (52%)
Frame = -1
Query: 1115 LSLQSNRLTSMTGLEGCIALEELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQN 936
L L N++ + LE LE L +S N + +EG+ L L+ L + +NK++ ++++ N
Sbjct: 82 LDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSN 141
Query: 935 LTQLEDLWLNDNQIDSLEGFDEAVAGSTEKLTTIYLENNPCAKLSNYAAI 786
L QL+ L L N+I ++E D + L +++L N KL N A+
Sbjct: 142 LHQLQMLELGSNRIRAIENID-----TLTNLESLFLGKNKITKLQNLDAL 186
Score = 40.4 bits (93), Expect = 0.051
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Frame = -1
Query: 1055 EELYLSHNGITKMEGLSSLVNLRVLDVSSNKLTSVDDIQNLTQLEDLWLNDNQIDSLEGF 876
E++ L+H I K+EG L ++ L + N + +++++ L L +L L DNQI +E
Sbjct: 36 EDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENL 95
Query: 875 DEAV-----------------AGSTEKLTTIYLENNPCAKLSN 798
+ +L ++L NN +K+ N
Sbjct: 96 EALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIEN 138
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 920,698,065
Number of Sequences: 1393205
Number of extensions: 19786886
Number of successful extensions: 47006
Number of sequences better than 10.0: 888
Number of HSP's better than 10.0 without gapping: 43259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46620
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 67536501012
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
