>KMC004376A_C01 KMC004376A_c01
ggtaggaaccttctattttatttataaaaaaatgaAATACAGAAAACAAATAAGAGGACA
AATATAAAAAATTAACATAACAACAAAAACACATTGAGGATTAATGAAAAAACTGGGTGG
GGTTTAGTCATTGTGCTGACGTGGCACTAATTTAACAAACTTTGAGTGGCTTTTCACAGA
GGCAATCGTTGGAAGCAAATGACGACGCATCAACATGATCCAAGTAATCTCCACTGGGAA
TTGGGCCGCAGAGATGGTTGTGGCTAAAGTCCAAGTACCCAATGTAGGAAGAAGAAGATA
TGGATTTGGGTATAGGACCCTTGAGATTATTGTAGGAAAAATCCATTGACGTGAAATAAG
TCT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004376A_C01 KMC004376A_c01
         (363 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_188718.1| disease resistance protein family (LRR); protei...   107  3e-23
emb|CAD56505.1| polygalacturonase inhibitor-like protein [Cicer ...   107  4e-23
gb|AAM65656.1| leucine rich repeat protein, putative [Arabidopsi...    96  1e-19
ref|NP_196798.1| leucine rich repeat protein family; protein id:...    96  1e-19
gb|AAK64162.1| unknown protein [Arabidopsis thaliana]                  92  2e-18

>ref|NP_188718.1| disease resistance protein family (LRR); protein id: At3g20820.1,
           supported by cDNA: gi_17380931 [Arabidopsis thaliana]
           gi|9294409|dbj|BAB02490.1| polygalacturonase
           inhibitor-like protein [Arabidopsis thaliana]
           gi|17380932|gb|AAL36278.1| unknown protein [Arabidopsis
           thaliana] gi|21436417|gb|AAM51409.1| unknown protein
           [Arabidopsis thaliana]
          Length = 365

 Score =  107 bits (268), Expect = 3e-23
 Identities = 46/69 (66%), Positives = 56/69 (80%)
 Frame = -3

Query: 361 TYFTSMDFSYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPSGDYLDHVDASSFASNDC 182
           +YFT +D SYNNLKGPIP+SIS +S+IG+LD SHNHLCG IP G   DH++A+SF  NDC
Sbjct: 294 SYFTVLDLSYNNLKGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAASFMFNDC 353

Query: 181 LCEKPLKVC 155
           LC KPL+ C
Sbjct: 354 LCGKPLRAC 362

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -3

Query: 331 NNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPS 233
           N + G IPKS+++ S + +LD  +N + G IPS
Sbjct: 161 NRISGSIPKSLTNLSSLMHLDLRNNLISGVIPS 193

>emb|CAD56505.1| polygalacturonase inhibitor-like protein [Cicer arietinum]
          Length = 322

 Score =  107 bits (267), Expect = 4e-23
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = -3

Query: 361 TYFTSMDFSYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPSGDYLDHVDASSFASNDC 182
           +YFT +D SYN+LKGPIPKS+  +SYIG+LD S+NHLCG IP G   DH++ASSF  NDC
Sbjct: 252 SYFTVLDLSYNSLKGPIPKSMGLASYIGHLDLSYNHLCGKIPVGSPFDHLEASSFVYNDC 311

Query: 181 LCEKPLKVC 155
           LC KPLKVC
Sbjct: 312 LCGKPLKVC 320

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = -3

Query: 337 SYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIP 236
           S N + GPIP SIS    +  LD S N + GPIP
Sbjct: 165 SGNKISGPIPDSISRIYRLADLDLSRNQVSGPIP 198

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -3

Query: 352 TSMDFSYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIP 236
           T ++ + N + G IP S+++   + +LD  +N + GPIP
Sbjct: 112 TVLNVADNAISGNIPPSLTNLRSLMHLDIRNNQISGPIP 150

>gb|AAM65656.1| leucine rich repeat protein, putative [Arabidopsis thaliana]
          Length = 371

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 42/69 (60%), Positives = 53/69 (75%)
 Frame = -3

Query: 361 TYFTSMDFSYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPSGDYLDHVDASSFASNDC 182
           +YFT +D + N L+GPIP SI+++S+IG+LD SHNHLCG IP G   DH+DA+SFA N C
Sbjct: 301 SYFTVLDLANNRLQGPIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDATSFAYNAC 360

Query: 181 LCEKPLKVC 155
           LC KPL  C
Sbjct: 361 LCGKPLGNC 369

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 337 SYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPS 233
           S N + G IP+S++    +  L+ S N L GPIP+
Sbjct: 214 SGNKISGQIPESLTRIYRLADLELSMNRLTGPIPA 248

>ref|NP_196798.1| leucine rich repeat protein family; protein id: At5g12940.1,
           supported by cDNA: 41409., supported by cDNA:
           gi_14532721 [Arabidopsis thaliana]
           gi|11358226|pir||T49908 hypothetical protein T24H18.110
           - Arabidopsis thaliana gi|7630050|emb|CAB88258.1|
           putative protein [Arabidopsis thaliana]
          Length = 371

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 42/69 (60%), Positives = 53/69 (75%)
 Frame = -3

Query: 361 TYFTSMDFSYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPSGDYLDHVDASSFASNDC 182
           +YFT +D + N L+GPIP SI+++S+IG+LD SHNHLCG IP G   DH+DA+SFA N C
Sbjct: 301 SYFTVLDLANNRLQGPIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDATSFAYNAC 360

Query: 181 LCEKPLKVC 155
           LC KPL  C
Sbjct: 361 LCGKPLGNC 369

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 337 SYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPS 233
           S N + G IP S++    +  L+ S N L GPIP+
Sbjct: 214 SGNKISGQIPDSLTRIYRLADLELSMNRLTGPIPA 248

>gb|AAK64162.1| unknown protein [Arabidopsis thaliana]
          Length = 371

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 41/69 (59%), Positives = 52/69 (74%)
 Frame = -3

Query: 361 TYFTSMDFSYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPSGDYLDHVDASSFASNDC 182
           +YFT +D + N L+G IP SI+++S+IG+LD SHNHLCG IP G   DH+DA+SFA N C
Sbjct: 301 SYFTVLDLANNRLQGLIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDATSFAYNAC 360

Query: 181 LCEKPLKVC 155
           LC KPL  C
Sbjct: 361 LCGKPLGNC 369

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 337 SYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPS 233
           S N + G IP S++    +  L+ S N L GPIP+
Sbjct: 214 SGNKISGQIPDSLTRIYRLADLELSMNRLTGPIPA 248

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 324,058,992
Number of Sequences: 1393205
Number of extensions: 6764069
Number of successful extensions: 22318
Number of sequences better than 10.0: 796
Number of HSP's better than 10.0 without gapping: 18430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22050
length of database: 448,689,247
effective HSP length: 96
effective length of database: 314,941,567
effective search space used: 7558597608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MR032c05_f BP078450 1 155 2 MWM062g10_f AV765695 36 363

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