Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004348A_C02 KMC004348A_c02
(491 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T02962 peroxidase (EC 1.11.1.7) isozyme 40K precursor, cati... 117 9e-26
pir||T02960 peroxidase (EC 1.11.1.7) isozyme 38K precursor, cati... 115 3e-25
gb|AAA65637.1| peroxidase 103 1e-21
ref|NP_188814.1| peroxidase, putative; protein id: At3g21770.1, ... 101 4e-21
gb|AAM61382.1| putative peroxidase [Arabidopsis thaliana] 100 7e-21
>pir||T02962 peroxidase (EC 1.11.1.7) isozyme 40K precursor, cationic - common
tobacco gi|575605|dbj|BAA07664.1| cationic peroxidase
isozyme 40K precursor [Nicotiana tabacum]
Length = 331
Score = 117 bits (292), Expect = 9e-26
Identities = 56/93 (60%), Positives = 72/93 (77%)
Frame = -1
Query: 488 CKSLSDTTTTVDMDPNSGTTFDSNYYSILLQNKGMFQSDAALLATKQSKKIVNELVGQNK 309
C + ++ TTV+MDP S T+FDSNY++IL QNKG+FQSDAALL K+S K+V +L N
Sbjct: 239 CPNPANPATTVEMDPQSSTSFDSNYFNILTQNKGLFQSDAALLTDKKSAKVVKQLQKTNA 298
Query: 308 FFTEFGQSMKRMGAIEVLSGTAGEIRTKCSVVN 210
FF+EF +SM++MGAIEVL+G AGEIR C V N
Sbjct: 299 FFSEFAKSMQKMGAIEVLTGNAGEIRKNCRVRN 331
>pir||T02960 peroxidase (EC 1.11.1.7) isozyme 38K precursor, cationic - common
tobacco gi|575603|dbj|BAA07663.1| cationic peroxidase
isozyme 38K precursor [Nicotiana tabacum]
Length = 329
Score = 115 bits (288), Expect = 3e-25
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = -1
Query: 488 CKSLSDTTTTVDMDPNSGTTFDSNYYSILLQNKGMFQSDAALLATKQSKKIVNELVGQNK 309
C + ++ TTV+MDP S T+FDSNY++IL QNKG+FQSDA LL K+S K+V +L N
Sbjct: 237 CPNPANPATTVEMDPQSSTSFDSNYFNILTQNKGLFQSDAVLLTDKKSAKVVKQLQKTNT 296
Query: 308 FFTEFGQSMKRMGAIEVLSGTAGEIRTKCSVVN 210
FF+EF +SM++MGAIEVL+G AGEIR C V N
Sbjct: 297 FFSEFAKSMQKMGAIEVLTGNAGEIRKSCRVRN 329
>gb|AAA65637.1| peroxidase
Length = 328
Score = 103 bits (257), Expect = 1e-21
Identities = 49/97 (50%), Positives = 70/97 (71%), Gaps = 2/97 (2%)
Frame = -1
Query: 491 KCKSLSDTTTTVDMDPNSGTTFDSNYYSILLQNKGMFQSDAALLATKQSKKIVNELVG-- 318
KC+S++D TT V+MDP S TFD +Y+ +LL+ +G+FQSDAAL +K + +LV
Sbjct: 232 KCRSINDNTTIVEMDPGSFKTFDLSYFKLLLKRRGLFQSDAALTTRTSTKSFIEQLVDGP 291
Query: 317 QNKFFTEFGQSMKRMGAIEVLSGTAGEIRTKCSVVNS 207
N+FF EF +SM++MG +EV +G+AGEIR C+ VNS
Sbjct: 292 LNEFFDEFAKSMEKMGRVEVKTGSAGEIRKHCAFVNS 328
>ref|NP_188814.1| peroxidase, putative; protein id: At3g21770.1, supported by cDNA:
118626., supported by cDNA: gi_18252200 [Arabidopsis
thaliana] gi|25453212|sp|Q9LSY7|PE30_ARATH Peroxidase 30
precursor (Atperox P30) (PRXR9) (ATP7a)
gi|11994644|dbj|BAB02839.1| peroxidase [Arabidopsis
thaliana] gi|18252201|gb|AAL61933.1| peroxidase
[Arabidopsis thaliana] gi|21386965|gb|AAM47886.1|
peroxidase [Arabidopsis thaliana]
Length = 329
Score = 101 bits (252), Expect = 4e-21
Identities = 46/97 (47%), Positives = 71/97 (72%), Gaps = 2/97 (2%)
Frame = -1
Query: 491 KCKSLSDTTTTVDMDPNSGTTFDSNYYSILLQNKGMFQSDAALLATKQSKKIVNELV--G 318
KCKSL+D +T ++MDP S +FD +YY ++L+ +G+FQSD+AL + K++N+LV
Sbjct: 233 KCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGS 292
Query: 317 QNKFFTEFGQSMKRMGAIEVLSGTAGEIRTKCSVVNS 207
+ KFF F +SM++MG ++V +G+AG IRT+CSV S
Sbjct: 293 EKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCSVAGS 329
>gb|AAM61382.1| putative peroxidase [Arabidopsis thaliana]
Length = 326
Score = 100 bits (250), Expect = 7e-21
Identities = 46/97 (47%), Positives = 70/97 (71%), Gaps = 2/97 (2%)
Frame = -1
Query: 491 KCKSLSDTTTTVDMDPNSGTTFDSNYYSILLQNKGMFQSDAALLATKQSKKIVNELV--G 318
KCKSL+D +T ++MDP S +FD +YY ++L+ +G+FQSD+AL + K++N+LV
Sbjct: 230 KCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGS 289
Query: 317 QNKFFTEFGQSMKRMGAIEVLSGTAGEIRTKCSVVNS 207
+ KFF F +SM++MG + V +G+AG IRT+CSV S
Sbjct: 290 EKKFFKAFAKSMEKMGRVXVKTGSAGVIRTRCSVAGS 326
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 402,353,200
Number of Sequences: 1393205
Number of extensions: 8051220
Number of successful extensions: 20652
Number of sequences better than 10.0: 420
Number of HSP's better than 10.0 without gapping: 19925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20348
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
