Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004329A_C01 KMC004329A_c01
(678 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM53276.1| quinone oxidoreductase-like protein [Arabidopsis ... 157 1e-37
ref|NP_197199.1| quinone oxidoreductase -like protein; protein i... 157 1e-37
dbj|BAC43246.1| putative quinone oxidoreductase [Arabidopsis tha... 154 1e-36
ref|NP_197200.1| quinone oxidoreductase -like protein; protein i... 154 1e-36
ref|NP_186958.1| putative NADP-dependent oxidoreductase; protein... 153 2e-36
>gb|AAM53276.1| quinone oxidoreductase-like protein [Arabidopsis thaliana]
Length = 345
Score = 157 bits (397), Expect = 1e-37
Identities = 73/101 (72%), Positives = 87/101 (85%)
Frame = -1
Query: 678 MKLHGRIPVCGMISQYHLTQHEGVANLANLIFKRVRMEGFVVSDFYHLYPKFLEFVLPHI 499
M +HGRI VCGMISQY+L EGV NL+N+I+KR+R++GFVVSDFY Y KFLEFVLPHI
Sbjct: 245 MNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHI 304
Query: 498 REGKVVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVVARD 376
REGK+ YVED+A+GLE P ALVGLF G+NVGKQV+VVAR+
Sbjct: 305 REGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>ref|NP_197199.1| quinone oxidoreductase -like protein; protein id: At5g16970.1
[Arabidopsis thaliana] gi|2498731|sp|Q39172|P1_ARATH
Probable NADP-dependent oxidoreductase P1
gi|1362013|pir||S57611 probable NADPH2:quinone reductase
(EC 1.6.5.5) P1 [similarity] - Arabidopsis thaliana
gi|886428|emb|CAA89838.1| zeta-crystallin homologue
[Arabidopsis thaliana] gi|9755698|emb|CAC01710.1|
quinone oxidoreductase-like protein [Arabidopsis
thaliana]
Length = 345
Score = 157 bits (397), Expect = 1e-37
Identities = 73/101 (72%), Positives = 87/101 (85%)
Frame = -1
Query: 678 MKLHGRIPVCGMISQYHLTQHEGVANLANLIFKRVRMEGFVVSDFYHLYPKFLEFVLPHI 499
M +HGRI VCGMISQY+L EGV NL+N+I+KR+R++GFVVSDFY Y KFLEFVLPHI
Sbjct: 245 MNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHI 304
Query: 498 REGKVVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVVARD 376
REGK+ YVED+A+GLE P ALVGLF G+NVGKQV+VVAR+
Sbjct: 305 REGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>dbj|BAC43246.1| putative quinone oxidoreductase [Arabidopsis thaliana]
gi|28950797|gb|AAO63322.1| At5g16980 [Arabidopsis
thaliana]
Length = 239
Score = 154 bits (388), Expect = 1e-36
Identities = 70/101 (69%), Positives = 87/101 (85%)
Frame = -1
Query: 678 MKLHGRIPVCGMISQYHLTQHEGVANLANLIFKRVRMEGFVVSDFYHLYPKFLEFVLPHI 499
M +HGRI VCGMISQY+L EGV NL+N+I+KR+R++GFVVSDFY Y KFLEF+ PHI
Sbjct: 139 MNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDEYSKFLEFLHPHI 198
Query: 498 REGKVVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVVARD 376
+EGK+ YVED+A+GLE GP ALVGLF G+NVGKQV+V+AR+
Sbjct: 199 KEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 239
>ref|NP_197200.1| quinone oxidoreductase -like protein; protein id: At5g16980.1
[Arabidopsis thaliana] gi|11358740|pir||T51553 quinone
oxidoreductase-like protein - Arabidopsis thaliana
gi|9755699|emb|CAC01711.1| quinone oxidoreductase-like
protein [Arabidopsis thaliana]
Length = 311
Score = 154 bits (388), Expect = 1e-36
Identities = 70/101 (69%), Positives = 87/101 (85%)
Frame = -1
Query: 678 MKLHGRIPVCGMISQYHLTQHEGVANLANLIFKRVRMEGFVVSDFYHLYPKFLEFVLPHI 499
M +HGRI VCGMISQY+L EGV NL+N+I+KR+R++GFVVSDFY Y KFLEF+ PHI
Sbjct: 211 MNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDEYSKFLEFLHPHI 270
Query: 498 REGKVVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVVARD 376
+EGK+ YVED+A+GLE GP ALVGLF G+NVGKQV+V+AR+
Sbjct: 271 KEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 311
>ref|NP_186958.1| putative NADP-dependent oxidoreductase; protein id: At3g03080.1
[Arabidopsis thaliana]
gi|6714428|gb|AAF26116.1|AC012328_19 putative
NADP-dependent oxidoreductase [Arabidopsis thaliana]
Length = 350
Score = 153 bits (386), Expect = 2e-36
Identities = 70/101 (69%), Positives = 89/101 (87%)
Frame = -1
Query: 678 MKLHGRIPVCGMISQYHLTQHEGVANLANLIFKRVRMEGFVVSDFYHLYPKFLEFVLPHI 499
MKLHGRI VCGMISQY+L EGV NLAN+I+KR+R++GFVVSD++ + KFL+FVLP+I
Sbjct: 250 MKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFLDFVLPYI 309
Query: 498 REGKVVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVVARD 376
REGK+ YVED+ EGLENGP+AL+GLF G+NVGKQ++ VAR+
Sbjct: 310 REGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVARE 350
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 568,668,217
Number of Sequences: 1393205
Number of extensions: 11888177
Number of successful extensions: 32899
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 31691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32804
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
