Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004317A_C01 KMC004317A_c01
(587 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S71923 cysteine proteinase (EC 3.4.22.-) - garden pea gi|11... 201 6e-51
emb|CAC41636.1| early leaf senescence abundant cysteine protease... 201 6e-51
gb|AAK07729.1| NTCP23-like cysteine proteinase [Nicotiana tabacum] 199 3e-50
dbj|BAA96501.1| cysteine protease [Nicotiana tabacum] 199 3e-50
ref|NP_566880.1| cysteine proteinase AALP, putative; protein id:... 198 4e-50
>pir||S71923 cysteine proteinase (EC 3.4.22.-) - garden pea
gi|1134882|emb|CAA92583.1| cysteine protease [Pisum
sativum]
Length = 350
Score = 201 bits (511), Expect = 6e-51
Identities = 89/107 (83%), Positives = 99/107 (92%)
Frame = -2
Query: 583 SVNITLGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVG 404
SVNITLGAEDELKHA+AFARPVSVAF+VV FRLYK GVYTS CG+TPMDVNHAVLAVG
Sbjct: 244 SVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTSTACGSTPMDVNHAVLAVG 303
Query: 403 YGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIVA 263
YG+E+ +PYW+IKNSWG WGDHGYFKME+GKNMCGVATC+SYP+VA
Sbjct: 304 YGIEDGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVVA 350
>emb|CAC41636.1| early leaf senescence abundant cysteine protease [Pisum sativum]
Length = 350
Score = 201 bits (511), Expect = 6e-51
Identities = 89/107 (83%), Positives = 99/107 (92%)
Frame = -2
Query: 583 SVNITLGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVG 404
SVNITLGAEDELKHA+AFARPVSVAF+VV FRLYK GVYTS CG+TPMDVNHAVLAVG
Sbjct: 244 SVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTSTACGSTPMDVNHAVLAVG 303
Query: 403 YGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIVA 263
YG+E+ +PYW+IKNSWG WGDHGYFKME+GKNMCGVATC+SYP+VA
Sbjct: 304 YGIEDGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVVA 350
>gb|AAK07729.1| NTCP23-like cysteine proteinase [Nicotiana tabacum]
Length = 360
Score = 199 bits (505), Expect = 3e-50
Identities = 88/108 (81%), Positives = 99/108 (91%)
Frame = -2
Query: 586 DSVNITLGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAV 407
DSVNITLGAEDELK+AVA RPVS+AF+V+ GF+ YK GVYTS CGNTPMDVNHAVLAV
Sbjct: 253 DSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAV 312
Query: 406 GYGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIVA 263
GYGVEN VPYW+IKNSWG+ WGD+GYFKME+GKNMCG+ATCASYP+VA
Sbjct: 313 GYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVVA 360
>dbj|BAA96501.1| cysteine protease [Nicotiana tabacum]
Length = 360
Score = 199 bits (505), Expect = 3e-50
Identities = 88/108 (81%), Positives = 99/108 (91%)
Frame = -2
Query: 586 DSVNITLGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAV 407
DSVNITLGAEDELK+AVA RPVS+AF+V+ GF+ YK GVYTS CGNTPMDVNHAVLAV
Sbjct: 253 DSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAV 312
Query: 406 GYGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIVA 263
GYGVEN VPYW+IKNSWG+ WGD+GYFKME+GKNMCG+ATCASYP+VA
Sbjct: 313 GYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVVA 360
>ref|NP_566880.1| cysteine proteinase AALP, putative; protein id: At3g45310.1,
supported by cDNA: gi_20147206 [Arabidopsis thaliana]
gi|20147207|gb|AAM10319.1| AT3g45310/F18N11_70
[Arabidopsis thaliana]
Length = 358
Score = 198 bits (504), Expect = 4e-50
Identities = 89/108 (82%), Positives = 100/108 (92%)
Frame = -2
Query: 586 DSVNITLGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAV 407
DSVNITLGAEDELKHAV RPVSVAF+VV FR YK+GV+TS+TCGNTPMDVNHAVLAV
Sbjct: 251 DSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAV 310
Query: 406 GYGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIVA 263
GYGVE++VPYW+IKNSWG WGD+GYFKME+GKNMCGVATC+SYP+VA
Sbjct: 311 GYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGVATCSSYPVVA 358
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 554,480,509
Number of Sequences: 1393205
Number of extensions: 12580344
Number of successful extensions: 32228
Number of sequences better than 10.0: 1084
Number of HSP's better than 10.0 without gapping: 29991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31097
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
