KMC004297A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC004297A_C01 KMC004297A_c01
GAAAATGTTTAAATATAACACCCATACTTGTAGGAGGATGTAACATTACTCTTTTCACAC
TTTTCATGAAGTTGAAAAGGTAATTAACTGATCATTAGGATACTGATAAGTTGTCGACCA
CACATTGATGTGTAAGATTCCATTCAATTTTTATTACAAGAAAATTGGGCGTGGTTGGAA
TAAACATAATGGGAGTGTGATTCTTATGGCAAGGCAAACGCAGGCATGGTGGCAAAGCGA
AGTTGTTGAATCAAAGCAGTCAAGTGAGAGTGAGATGATCCGTTGTCTTGCACGGCTGTC
CTGGCCACCTGTGCAAGTTTGTGTGCTCTGTTTCTGAATGACTCTGCTTCTTCCTGTACC
ATTATACGATTGATTGCCCTCTCAACAGCGGAACTTGTTATGCTATCATCCCCCACAACT
CTAGCCCATTTCTTCACACCAACTGGGACTCCAATTTCAAGGATATCAGTCACAAGTTTT
TCATTGTAAAATTGCTCTGCGGACACAGGCCAAGT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004297A_C01 KMC004297A_c01
         (515 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB86926.1| glucosyltransferase-8 [Vigna angularis]               102  3e-21
dbj|BAA83484.1| UDP-glucose: flavonoid 7-O-glucosyltransferase [...    95  4e-19
gb|AAK28304.1|AF346432_1 phenylpropanoid:glucosyltransferase 2 [...    92  4e-18
gb|AAK28303.1|AF346431_1 phenylpropanoid:glucosyltransferase 1 [...    92  4e-18
pir||T03745 glucosyltransferase IS10a (EC 2.4.1.-), salicylate-i...    92  4e-18

>dbj|BAB86926.1| glucosyltransferase-8 [Vigna angularis]
          Length = 523

 Score =  102 bits (253), Expect = 3e-21
 Identities = 47/97 (48%), Positives = 69/97 (70%)
 Frame = -1

Query: 515 TWPVSAEQFYNEKLVTDILEIGVPVGVKKWARVVGDDSITSSAVERAINRIMVQEEAESF 336
           TWP+ AEQFYN K +TDI++IGV VGV+ W  ++G   +    +E+A+ RIMV +EAE  
Sbjct: 427 TWPMYAEQFYNAKFLTDIVKIGVSVGVQTWIGLMGGKPVKKEVIEKALKRIMVGDEAEEI 486

Query: 335 RNRAHKLAQVARTAVQDNGSSHSHLTALIQQLRFATM 225
           RNRA  +A++A+ AV++ GSS+S   +LI+ LR  T+
Sbjct: 487 RNRAKDIAKMAKRAVEEGGSSYSDFNSLIEDLRSRTL 523

>dbj|BAA83484.1| UDP-glucose: flavonoid 7-O-glucosyltransferase [Scutellaria
           baicalensis]
          Length = 476

 Score = 95.1 bits (235), Expect = 4e-19
 Identities = 48/92 (52%), Positives = 67/92 (72%)
 Frame = -1

Query: 515 TWPVSAEQFYNEKLVTDILEIGVPVGVKKWARVVGDDSITSSAVERAINRIMVQEEAESF 336
           TWPV AEQFYNEKLVT++L+ GV VG KKW RV   + + S AV+ A+ R+MV + A   
Sbjct: 375 TWPVFAEQFYNEKLVTEVLKTGVSVGNKKWQRV--GEGVGSEAVKEAVERVMVGDGAAEM 432

Query: 335 RNRAHKLAQVARTAVQDNGSSHSHLTALIQQL 240
           R+RA    ++AR AV++ GSS+++L ALI++L
Sbjct: 433 RSRALYYKEMARKAVEEGGSSYNNLNALIEEL 464

>gb|AAK28304.1|AF346432_1 phenylpropanoid:glucosyltransferase 2 [Nicotiana tabacum]
          Length = 476

 Score = 92.0 bits (227), Expect = 4e-18
 Identities = 44/92 (47%), Positives = 63/92 (67%)
 Frame = -1

Query: 515 TWPVSAEQFYNEKLVTDILEIGVPVGVKKWARVVGDDSITSSAVERAINRIMVQEEAESF 336
           TWPV AEQF+NEKLVT++L+ G  VG  +W R   +  +   A+ +AI R+MV EEAE F
Sbjct: 378 TWPVFAEQFFNEKLVTEVLKTGAGVGSIQWKRSASE-GVKREAIAKAIKRVMVSEEAEGF 436

Query: 335 RNRAHKLAQVARTAVQDNGSSHSHLTALIQQL 240
           RNRA    ++AR A++  GSS++ LT L++ +
Sbjct: 437 RNRAKAYKEMARKAIEGGGSSYTGLTTLLEDI 468

>gb|AAK28303.1|AF346431_1 phenylpropanoid:glucosyltransferase 1 [Nicotiana tabacum]
          Length = 476

 Score = 92.0 bits (227), Expect = 4e-18
 Identities = 43/92 (46%), Positives = 64/92 (68%)
 Frame = -1

Query: 515 TWPVSAEQFYNEKLVTDILEIGVPVGVKKWARVVGDDSITSSAVERAINRIMVQEEAESF 336
           TWPV AEQF+NEKLVT++L+ G  VG  +W R   +  +   A+ +AI R+MV EEA+ F
Sbjct: 378 TWPVFAEQFFNEKLVTEVLKTGAGVGSIQWKRSASE-GVKREAIAKAIKRVMVSEEADGF 436

Query: 335 RNRAHKLAQVARTAVQDNGSSHSHLTALIQQL 240
           RNRA    ++AR A+++ GSS++ LT L++ +
Sbjct: 437 RNRAKAYKEMARKAIEEGGSSYTGLTTLLEDI 468

>pir||T03745 glucosyltransferase IS10a (EC 2.4.1.-), salicylate-induced - common
           tobacco gi|1685003|gb|AAB36652.1| immediate-early
           salicylate-induced glucosyltransferase
          Length = 476

 Score = 92.0 bits (227), Expect = 4e-18
 Identities = 44/92 (47%), Positives = 63/92 (67%)
 Frame = -1

Query: 515 TWPVSAEQFYNEKLVTDILEIGVPVGVKKWARVVGDDSITSSAVERAINRIMVQEEAESF 336
           TWPV AEQF+NEKLVT++L+ G  VG  +W R   +  +   A+ +AI R+MV EEAE F
Sbjct: 378 TWPVFAEQFFNEKLVTEVLKTGAGVGSIQWKRSASE-GVKREAIAKAIKRVMVSEEAEGF 436

Query: 335 RNRAHKLAQVARTAVQDNGSSHSHLTALIQQL 240
           RNRA    ++AR A++  GSS++ LT L++ +
Sbjct: 437 RNRAKAYKEMARKAIEGGGSSYTGLTTLLEDI 468

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 455,040,493
Number of Sequences: 1393205
Number of extensions: 9634905
Number of successful extensions: 24116
Number of sequences better than 10.0: 189
Number of HSP's better than 10.0 without gapping: 23341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24056
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MR024a07_f BP077805 1 398
2 MR024c04_f BP077823 1 522
3 MR027f04_f BP078095 68 471
4 MRL041g04_f BP085730 143 420




Lotus japonicus
Kazusa DNA Research Institute