Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004270A_C01 KMC004270A_c01
(686 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175724.1| MAP kinase BnMAP4K alpha1, putative; protein id... 135 7e-31
pir||C96572 protein F12M16.4 [imported] - Arabidopsis thaliana g... 135 7e-31
emb|CAD44271.1| map 4 kinase alpha1 [Arabidopsis thaliana] 135 7e-31
emb|CAA08757.1| BnMAP4K alpha1 [Brassica napus] 134 2e-30
emb|CAA08758.1| BnMAP4K alpha2 [Brassica napus] 131 8e-30
>ref|NP_175724.1| MAP kinase BnMAP4K alpha1, putative; protein id: At1g53165.1
[Arabidopsis thaliana]
Length = 1007
Score = 135 bits (339), Expect = 7e-31
Identities = 74/156 (47%), Positives = 106/156 (67%), Gaps = 2/156 (1%)
Frame = -1
Query: 686 SHEYIDAHKDVSRSHNDSDDEEND-KIMSSSAPLSILLIPSLKEAIA-NDPEGSIAQTVI 513
S ++ D + V RS SDDEE+D K+ S SA LS+LL+PSLKEA+ +D +G+I V
Sbjct: 857 SRDHSDKQRPVMRSQQVSDDEEDDSKLASLSASLSLLLLPSLKEAVGGDDSKGTIGHRVS 916
Query: 512 NSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQIFNKTNSAEETHRNAEPD 333
SLV MER P S + I L++QL S+KE S+K++Q++A ++F KT N + +
Sbjct: 917 RSLVKMEREKPGSSEAFIAKLIEQLGSTKEVSVKEVQDMAIRVFAKT-------MNNDAE 969
Query: 332 NRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVN 225
N++KQ +K+ SN++ SPLARFL SRW GQ+SRD+N
Sbjct: 970 NKRKQASKEFSSNANFSPLARFLFSRWLGQTSRDLN 1005
>pir||C96572 protein F12M16.4 [imported] - Arabidopsis thaliana
gi|7769851|gb|AAF69529.1|AC008007_4 F12M16.4
[Arabidopsis thaliana]
Length = 690
Score = 135 bits (339), Expect = 7e-31
Identities = 74/156 (47%), Positives = 106/156 (67%), Gaps = 2/156 (1%)
Frame = -1
Query: 686 SHEYIDAHKDVSRSHNDSDDEEND-KIMSSSAPLSILLIPSLKEAIA-NDPEGSIAQTVI 513
S ++ D + V RS SDDEE+D K+ S SA LS+LL+PSLKEA+ +D +G+I V
Sbjct: 540 SRDHSDKQRPVMRSQQVSDDEEDDSKLASLSASLSLLLLPSLKEAVGGDDSKGTIGHRVS 599
Query: 512 NSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQIFNKTNSAEETHRNAEPD 333
SLV MER P S + I L++QL S+KE S+K++Q++A ++F KT N + +
Sbjct: 600 RSLVKMEREKPGSSEAFIAKLIEQLGSTKEVSVKEVQDMAIRVFAKT-------MNNDAE 652
Query: 332 NRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVN 225
N++KQ +K+ SN++ SPLARFL SRW GQ+SRD+N
Sbjct: 653 NKRKQASKEFSSNANFSPLARFLFSRWLGQTSRDLN 688
>emb|CAD44271.1| map 4 kinase alpha1 [Arabidopsis thaliana]
Length = 679
Score = 135 bits (339), Expect = 7e-31
Identities = 74/156 (47%), Positives = 106/156 (67%), Gaps = 2/156 (1%)
Frame = -1
Query: 686 SHEYIDAHKDVSRSHNDSDDEEND-KIMSSSAPLSILLIPSLKEAIA-NDPEGSIAQTVI 513
S ++ D + V RS SDDEE+D K+ S SA LS+LL+PSLKEA+ +D +G+I V
Sbjct: 529 SRDHSDKQRPVMRSQQVSDDEEDDSKLASLSASLSLLLLPSLKEAVGGDDSKGTIGHRVS 588
Query: 512 NSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQIFNKTNSAEETHRNAEPD 333
SLV MER P S + I L++QL S+KE S+K++Q++A ++F KT N + +
Sbjct: 589 RSLVKMEREKPGSSEAFIAKLIEQLGSTKEVSVKEVQDMAIRVFAKT-------MNNDAE 641
Query: 332 NRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVN 225
N++KQ +K+ SN++ SPLARFL SRW GQ+SRD+N
Sbjct: 642 NKRKQASKEFSSNANFSPLARFLFSRWLGQTSRDLN 677
>emb|CAA08757.1| BnMAP4K alpha1 [Brassica napus]
Length = 684
Score = 134 bits (336), Expect = 2e-30
Identities = 71/157 (45%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Frame = -1
Query: 686 SHEYIDAHKDVSRSHNDSDDEENDKIMSSSAPLSILLIPSLKEAIANDP-EGSIAQTVIN 510
S + D K + RS SDDE+ ++ S SA LS+LL+PSLKEA+ D +GS+ V
Sbjct: 535 SRDDSDKQKPLIRSQQVSDDEDESELASLSASLSLLLLPSLKEAVGGDTSKGSVGHRVSR 594
Query: 509 SLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQIFNKTNSAEETHRNAEPDN 330
+LV MER P S + I L++QL SSKE S+K++Q++A ++F KT N + +N
Sbjct: 595 ALVKMEREKPGSSEAFIAKLIEQLGSSKEVSVKEVQDMAIRVFGKT-------VNNDAEN 647
Query: 329 RKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVNPA 219
++KQ +K+ SN+++SPL RFL SRW GQ+SRD+NP+
Sbjct: 648 KRKQASKEFASNTNVSPLGRFLFSRWLGQTSRDLNPS 684
>emb|CAA08758.1| BnMAP4K alpha2 [Brassica napus]
Length = 676
Score = 131 bits (330), Expect = 8e-30
Identities = 70/146 (47%), Positives = 101/146 (68%), Gaps = 1/146 (0%)
Frame = -1
Query: 662 KDVSRSHNDSDDEENDKIMSS-SAPLSILLIPSLKEAIANDPEGSIAQTVINSLVNMERT 486
K + +S SD+EE D I S A LS+LLIPSLKEA+ +D +GSI + + SLV MER
Sbjct: 538 KALPKSQQVSDEEEEDPIWDSLPASLSVLLIPSLKEALGDDSKGSIGRALSRSLVAMERE 597
Query: 485 SPRSCDVLIKMLLQQLASSKESSLKDLQELAAQIFNKTNSAEETHRNAEPDNRKKQQNKD 306
+P SC+ + L++ L SSKE+S+K+LQ++A ++F+KT A+ +N++K NK+
Sbjct: 598 NPGSCEAFVAKLIELLGSSKEASVKELQDMAVRVFSKT-------APADAENKRKPANKE 650
Query: 305 LHSNSSLSPLARFLLSRWQGQSSRDV 228
SN+++SPL RFLLSRW QSSRD+
Sbjct: 651 FSSNTNVSPLGRFLLSRWISQSSRDL 676
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,776,804
Number of Sequences: 1393205
Number of extensions: 10155228
Number of successful extensions: 34158
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 31802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34075
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30835865868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
