Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004267A_C01 KMC004267A_c01
(583 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB40340.1| 12-oxophytodienoic acid 10, 11-reductase [Pisum ... 118 5e-26
ref|NP_177795.1| 12-oxophytodienoate reductase (OPR2); protein i... 109 2e-23
dbj|BAC42387.1| putative 12-oxophytodienoate reductase OPR2 [Ara... 109 2e-23
pir||T09943 probable 12-oxophytodienoate reductase (EC 1.3.1.42)... 109 3e-23
emb|CAA71627.1| 12-oxophytodienoate reductase [Arabidopsis thali... 108 6e-23
>dbj|BAB40340.1| 12-oxophytodienoic acid 10, 11-reductase [Pisum sativum]
Length = 371
Score = 118 bits (296), Expect = 5e-26
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 581 EGINAIAENRADLIAYGRWFLANPDLPKRFALDAPLNKYNRETFYTSDPVIGYTDYPFL 405
+GI AIAENRADL+ YGRWF++NPDLPKRFALDAPLNKYNRETFY+SDPVIGYTDYPFL
Sbjct: 303 DGIKAIAENRADLVVYGRWFISNPDLPKRFALDAPLNKYNRETFYSSDPVIGYTDYPFL 361
>ref|NP_177795.1| 12-oxophytodienoate reductase (OPR2); protein id: At1g76690.1
[Arabidopsis thaliana] gi|25325950|pir||C96795
hypothetical protein F28O16.6 [imported] - Arabidopsis
thaliana gi|3882356|gb|AAC78441.1| 12-oxophytodienoate
reductase OPR2 [Arabidopsis thaliana]
gi|6143903|gb|AAF04449.1|AC010718_18 12-oxophytodienoate
reductase (OPR2); 15748-17127 [Arabidopsis thaliana]
Length = 374
Score = 109 bits (273), Expect = 2e-23
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -3
Query: 581 EGINAIAENRADLIAYGRWFLANPDLPKRFALDAPLNKYNRETFYTSDPVIGYTDYPFLE 402
+G A+A+ R DL+AYGRWFLANPDLPKRF LDAPLNKYNR TFYTSDPV+GYTDYP LE
Sbjct: 312 DGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSLE 371
>dbj|BAC42387.1| putative 12-oxophytodienoate reductase OPR2 [Arabidopsis thaliana]
Length = 374
Score = 109 bits (273), Expect = 2e-23
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -3
Query: 581 EGINAIAENRADLIAYGRWFLANPDLPKRFALDAPLNKYNRETFYTSDPVIGYTDYPFLE 402
+G A+A+ R DL+AYGRWFLANPDLPKRF LDAPLNKYNR TFYTSDPV+GYTDYP LE
Sbjct: 312 DGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSLE 371
>pir||T09943 probable 12-oxophytodienoate reductase (EC 1.3.1.42) - Madagascar
periwinkle gi|2232254|gb|AAB62248.1| old-yellow-enzyme
homolog [Catharanthus roseus]
Length = 379
Score = 109 bits (272), Expect = 3e-23
Identities = 49/60 (81%), Positives = 54/60 (89%)
Frame = -3
Query: 581 EGINAIAENRADLIAYGRWFLANPDLPKRFALDAPLNKYNRETFYTSDPVIGYTDYPFLE 402
+GI A+AENRADL+ YGR FLANPDLPKRF L+APLNKYNRETFY DPV+GYTDYPFLE
Sbjct: 317 DGIKALAENRADLVVYGRLFLANPDLPKRFELNAPLNKYNRETFYIPDPVLGYTDYPFLE 376
>emb|CAA71627.1| 12-oxophytodienoate reductase [Arabidopsis thaliana]
Length = 370
Score = 108 bits (269), Expect = 6e-23
Identities = 46/60 (76%), Positives = 54/60 (89%)
Frame = -3
Query: 581 EGINAIAENRADLIAYGRWFLANPDLPKRFALDAPLNKYNRETFYTSDPVIGYTDYPFLE 402
+G A+++ R DL+AYGRWFLANPDLPKRF +DAPLNKY+R TFYTSDPV+GYTDYPFLE
Sbjct: 308 DGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFLE 367
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,505,358
Number of Sequences: 1393205
Number of extensions: 9004778
Number of successful extensions: 16527
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 16141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16503
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
