Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004261A_C01 KMC004261A_c01
(527 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC59823.1| Xaa-Pro aminopeptidase 1 [Lycopersicon esculentum] 114 7e-25
gb|AAN41402.1| aminopeptidase P [Arabidopsis thaliana] 112 2e-24
ref|NP_195394.1| aminopeptidase-like protein; protein id: At4g36... 112 2e-24
emb|CAC59824.1| Xaa-Pro aminopeptidase 2 [Lycopersicon esculentum] 108 5e-23
gb|AAH21534.1| Unknown (protein for IMAGE:5354362) [Mus musculus] 76 3e-13
>emb|CAC59823.1| Xaa-Pro aminopeptidase 1 [Lycopersicon esculentum]
Length = 655
Score = 114 bits (285), Expect = 7e-25
Identities = 50/69 (72%), Positives = 61/69 (87%)
Frame = -3
Query: 525 KFNFGDKGYLSFEHITWAPYQTKLIDLNLLTPDEINWLNSYHSRCRDILQPHLDDAAENE 346
KFNFG+KGYLSFEHITWAPYQ KLID++LL P+EI WLN YH++CR+IL P+L + +E E
Sbjct: 586 KFNFGNKGYLSFEHITWAPYQRKLIDVSLLIPEEIEWLNEYHAKCREILTPYL-NTSEME 644
Query: 345 WLKKATEPV 319
WLKKATEP+
Sbjct: 645 WLKKATEPI 653
>gb|AAN41402.1| aminopeptidase P [Arabidopsis thaliana]
Length = 644
Score = 112 bits (281), Expect = 2e-24
Identities = 51/71 (71%), Positives = 60/71 (83%)
Frame = -3
Query: 525 KFNFGDKGYLSFEHITWAPYQTKLIDLNLLTPDEINWLNSYHSRCRDILQPHLDDAAENE 346
+FNFGDKGYL FEHITWAPYQ KLIDL+ LT +EI+WLN+YHS+C+DIL P ++ E E
Sbjct: 573 EFNFGDKGYLQFEHITWAPYQVKLIDLDELTREEIDWLNTYHSKCKDILAPFMNQ-TEME 631
Query: 345 WLKKATEPVGV 313
WLKKATEPV V
Sbjct: 632 WLKKATEPVSV 642
>ref|NP_195394.1| aminopeptidase-like protein; protein id: At4g36760.1, supported by
cDNA: gi_13430673 [Arabidopsis thaliana]
gi|25331041|pir||B85434 aminopeptidase-like protein
[imported] - Arabidopsis thaliana
gi|4006893|emb|CAB16823.1| aminopeptidase-like protein
[Arabidopsis thaliana] gi|7270625|emb|CAB80342.1|
aminopeptidase-like protein [Arabidopsis thaliana]
Length = 634
Score = 112 bits (281), Expect = 2e-24
Identities = 51/71 (71%), Positives = 60/71 (83%)
Frame = -3
Query: 525 KFNFGDKGYLSFEHITWAPYQTKLIDLNLLTPDEINWLNSYHSRCRDILQPHLDDAAENE 346
+FNFGDKGYL FEHITWAPYQ KLIDL+ LT +EI+WLN+YHS+C+DIL P ++ E E
Sbjct: 563 EFNFGDKGYLQFEHITWAPYQVKLIDLDELTREEIDWLNTYHSKCKDILAPFMNQ-TEME 621
Query: 345 WLKKATEPVGV 313
WLKKATEPV V
Sbjct: 622 WLKKATEPVSV 632
>emb|CAC59824.1| Xaa-Pro aminopeptidase 2 [Lycopersicon esculentum]
Length = 654
Score = 108 bits (269), Expect = 5e-23
Identities = 47/69 (68%), Positives = 57/69 (82%)
Frame = -3
Query: 525 KFNFGDKGYLSFEHITWAPYQTKLIDLNLLTPDEINWLNSYHSRCRDILQPHLDDAAENE 346
KFNFGDKGYL+FEHITWAPYQ KLID++LL P+EI WLN YH +C +IL P+L+ +E E
Sbjct: 585 KFNFGDKGYLTFEHITWAPYQRKLIDVSLLVPEEIQWLNEYHCKCSEILAPYLNQ-SEME 643
Query: 345 WLKKATEPV 319
WLK AT P+
Sbjct: 644 WLKNATAPI 652
>gb|AAH21534.1| Unknown (protein for IMAGE:5354362) [Mus musculus]
Length = 347
Score = 75.9 bits (185), Expect = 3e-13
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Frame = -3
Query: 525 KFNFGDKGYLSFEHITWAPYQTKLIDLNLLTPDEINWLNSYHSRCRDILQPHLDDAAEN- 349
K+NF ++G L+FE +T P QTK+ID+N LT E +WLNSYH CRD++ L
Sbjct: 272 KYNFNNRGSLTFEPLTLVPIQTKMIDVNALTDKECDWLNSYHQTCRDVVGKELQSQGRQE 331
Query: 348 --EWLKKATEPV 319
EWL + TEPV
Sbjct: 332 ALEWLIRETEPV 343
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 422,291,665
Number of Sequences: 1393205
Number of extensions: 8127599
Number of successful extensions: 17782
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 17358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17772
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
