Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004257A_C01 KMC004257A_c01
(535 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA88195.1| unnamed protein product [Oryza sativa (japonica ... 149 3e-35
dbj|BAA88198.1| unnamed protein product [Oryza sativa (japonica ... 145 4e-34
ref|NP_175321.1| flavin-containing monooxygenase, putative; prot... 132 3e-30
gb|AAF34432.1|AF172282_21 hypothetical protein, similar to flavi... 123 2e-27
gb|AAF34433.1|AF172282_22 hypothetical protein, similar to flavi... 122 2e-27
>dbj|BAA88195.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 398
Score = 149 bits (375), Expect = 3e-35
Identities = 65/129 (50%), Positives = 92/129 (70%)
Frame = -1
Query: 532 YGIARPNEGPFCMKVKYGKYPVIDTGTIHKIKSGDLKVLPSEIEYVRDKNVLLKNGELHP 353
YG+ RP GPF MK YPV+D GT KI+SG+++VLP+ I+ VR ++V +G+ H
Sbjct: 253 YGLRRPAVGPFTMKATTTMYPVVDVGTFAKIRSGEIRVLPAAIKGVRGRDVEFADGQRHA 312
Query: 352 FDSIIFCTGFKRSTHKWLKGDDYLLNDDGLPKPSYPMYWKGKKGLYCVGLSRRGLYGAAA 173
FD+++F TG++ +T WLK DD L+ DDG+ SYP +WKG+ GLYC G+ RRG+YG+
Sbjct: 313 FDAVVFATGYRSTTKHWLKSDDGLIGDDGMAGRSYPDHWKGENGLYCAGMVRRGIYGSYE 372
Query: 172 DGENIANDI 146
D E+IA+DI
Sbjct: 373 DAEHIADDI 381
>dbj|BAA88198.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 437
Score = 145 bits (365), Expect = 4e-34
Identities = 65/129 (50%), Positives = 90/129 (69%)
Frame = -1
Query: 532 YGIARPNEGPFCMKVKYGKYPVIDTGTIHKIKSGDLKVLPSEIEYVRDKNVLLKNGELHP 353
YG+ RP GPF MK+ YPV D GT KI+SG+++V+P+ I+ VR +V +G H
Sbjct: 287 YGLRRPAVGPFSMKMTTPAYPVFDVGTFAKIRSGEIRVVPAGIKSVRGGDVEFADGRRHA 346
Query: 352 FDSIIFCTGFKRSTHKWLKGDDYLLNDDGLPKPSYPMYWKGKKGLYCVGLSRRGLYGAAA 173
FD+I+F TG++ +T +WLK DD L+ DDG+ SYP +WKG+ GLYC G+ RRG+YG+
Sbjct: 347 FDAIVFATGYRSTTKQWLKSDDGLIGDDGMAGRSYPDHWKGENGLYCAGMVRRGIYGSGE 406
Query: 172 DGENIANDI 146
D E IA+DI
Sbjct: 407 DAELIADDI 415
>ref|NP_175321.1| flavin-containing monooxygenase, putative; protein id: At1g48910.1
[Arabidopsis thaliana] gi|25405284|pir||H96526 probable
flavin-containing monooxygenase [imported] - Arabidopsis
thaliana gi|11094816|gb|AAG29745.1|AC084414_13
flavin-containing monooxygenase, putative [Arabidopsis
thaliana]
Length = 383
Score = 132 bits (332), Expect = 3e-30
Identities = 58/131 (44%), Positives = 84/131 (63%)
Frame = -1
Query: 532 YGIARPNEGPFCMKVKYGKYPVIDTGTIHKIKSGDLKVLPSEIEYVRDKNVLLKNGELHP 353
YG+ RP +GPF K+ GK PVID GT+ KI+ G+++V+ I + K + +NG
Sbjct: 245 YGLFRPKQGPFATKLFTGKAPVIDVGTVEKIRDGEIQVINGGIGSINGKTLTFENGHKQD 304
Query: 352 FDSIIFCTGFKRSTHKWLKGDDYLLNDDGLPKPSYPMYWKGKKGLYCVGLSRRGLYGAAA 173
FD+I+F TG+K S WL+ +Y++ DG PK P +WKG+K LYC G SR+G+ G A
Sbjct: 305 FDAIVFATGYKSSVCNWLEDYEYVMKKDGFPKAPMPKHWKGEKNLYCAGFSRKGIAGGAE 364
Query: 172 DGENIANDIIS 140
D ++A+DI S
Sbjct: 365 DAMSVADDIRS 375
>gb|AAF34432.1|AF172282_21 hypothetical protein, similar to flavin-containing monooxygenases
[Oryza sativa]
Length = 387
Score = 123 bits (308), Expect = 2e-27
Identities = 60/139 (43%), Positives = 84/139 (60%)
Frame = -1
Query: 532 YGIARPNEGPFCMKVKYGKYPVIDTGTIHKIKSGDLKVLPSEIEYVRDKNVLLKNGELHP 353
+GI RP GP +K + G+ VID GT IK G +KV I + +V G +
Sbjct: 251 HGIMRPKMGPLLLKSQTGRSAVIDVGTARLIKGGVIKVFQG-ISKINTNSVEFHGGRQNS 309
Query: 352 FDSIIFCTGFKRSTHKWLKGDDYLLNDDGLPKPSYPMYWKGKKGLYCVGLSRRGLYGAAA 173
FD+I+F TG+K + + WLK + + DDG PK +P +W+G+ GLYC G +RRGL G A
Sbjct: 310 FDAIVFATGYKSTVNAWLKNGESMFKDDGFPKNYFPNHWRGENGLYCAGFARRGLAGIAM 369
Query: 172 DGENIANDIISSIMQN*SC 116
D +NIANDI+++ M SC
Sbjct: 370 DAKNIANDIVAA-MDKMSC 387
>gb|AAF34433.1|AF172282_22 hypothetical protein, similar to flavin-containing monooxygenases
[Oryza sativa]
Length = 387
Score = 122 bits (307), Expect = 2e-27
Identities = 57/135 (42%), Positives = 84/135 (62%)
Frame = -1
Query: 532 YGIARPNEGPFCMKVKYGKYPVIDTGTIHKIKSGDLKVLPSEIEYVRDKNVLLKNGELHP 353
+GI RP GP +K + G+ VID GT IK G +KV I ++ ++ G+ P
Sbjct: 251 HGITRPKIGPLLLKSQTGRSAVIDVGTARLIKGGVIKVFQG-ISKIKTNSIEFHGGKQIP 309
Query: 352 FDSIIFCTGFKRSTHKWLKGDDYLLNDDGLPKPSYPMYWKGKKGLYCVGLSRRGLYGAAA 173
FD+I+F TG+K + + WLK + + DDG PK +P +WKG+ GLYC G +RRGL G A
Sbjct: 310 FDAIVFATGYKSTVNTWLKNGESMFKDDGFPKKFFPNHWKGENGLYCAGFARRGLAGIAM 369
Query: 172 DGENIANDIISSIMQ 128
D +NIA+ I++++ Q
Sbjct: 370 DAKNIADHIVATMDQ 384
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 487,381,550
Number of Sequences: 1393205
Number of extensions: 10694610
Number of successful extensions: 25625
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 24702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25555
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
