Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004255A_C01 KMC004255A_c01
(599 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_472948.1| erythrocyte membrane protein 3 [Plasmodium falc... 39 0.067
pir||S31806 emp3 protein - malaria parasite (Plasmodium falcipar... 39 0.067
gb|AAF01136.1| erythrocyte membrane protein 3 [Plasmodium falcip... 36 0.33
gb|AAF01135.1| erythrocyte membrane protein 3 [Plasmodium falcip... 35 0.56
gb|AAK48418.1| chloroquine resistance marker protein [Plasmodium... 33 2.8
>ref|NP_472948.1| erythrocyte membrane protein 3 [Plasmodium falciparum 3D7]
gi|7494164|pir||D71623 erythrocyte membrane protein
PfEMP3 PFB0095c - malaria parasite (Plasmodium
falciparum) gi|3845093|gb|AAC71809.1| erythrocyte
membrane protein 3 [Plasmodium falciparum 3D7]
Length = 2441
Score = 38.5 bits (88), Expect = 0.067
Identities = 26/85 (30%), Positives = 41/85 (47%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + P K Q K TP ++ N T +N+ N+R QNT
Sbjct: 1441 QQNTGLKNAANKGQQNTGLKNTPSKGQQNT--GLKNTPNERQQN--TGLKNTPNERQQNT 1496
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1497 GLKNTPSEGQQNNDLKNTPNERQQN 1521
Score = 37.4 bits (85), Expect = 0.15
Identities = 26/85 (30%), Positives = 40/85 (46%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP ++ N T +N+ NK QNT
Sbjct: 1701 QQNTGLKNTPNERQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNAANKGQQNT 1756
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1757 GLKNTPNEGQQNTGLKNTPSEGQQN 1781
Score = 36.6 bits (83), Expect = 0.25
Identities = 26/86 (30%), Positives = 41/86 (47%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + K Q K TP + + N T +N+ N+R QNT
Sbjct: 1428 QQNTGLKNTPNERQQNTGLKNAANKGQQNT--GLKNTPSKGQQN--TGLKNTPNERQQNT 1483
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQDH 260
GL+ Q TP QQ++
Sbjct: 1484 GLKNTPNERQQNTGLKNTPSEGQQNN 1509
Score = 36.2 bits (82), Expect = 0.33
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP ++ N T +N+ NK QNT
Sbjct: 1779 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNAANKGQQNT 1834
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1835 GLKNTPNEGQQNTGLKNTPSEGQQN 1859
Score = 35.4 bits (80), Expect = 0.56
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1532 QQNTGLKNAPNERQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 1587
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q P QQ+
Sbjct: 1588 GLKNTASKGQQNTGLKNAPNERQQN 1612
Score = 35.4 bits (80), Expect = 0.56
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1662 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPSGGQQN--TGLKNTPNERQQNT 1717
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1718 GLKNTPSEGQQNTGLKNTPNERQQN 1742
Score = 35.4 bits (80), Expect = 0.56
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 2156 QQNTGLKNTPSEGQPNTGLKNTPNEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 2211
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 2212 GLKNTPSEGQQNTGLKNTPSEGQQN 2236
Score = 35.4 bits (80), Expect = 0.56
Identities = 26/85 (30%), Positives = 40/85 (46%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1337 QQNTGLKNTPNERQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 1392
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1393 GLKNTPSEGQQNTGLKNTPIEGQQN 1417
Score = 35.0 bits (79), Expect = 0.74
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1766 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 1821
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1822 GLKNAANKGQQNTGLKNTPNEGQQN 1846
Score = 35.0 bits (79), Expect = 0.74
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 2195 QQNTGLKNAANKGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 2250
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 2251 GLKNTPSEGQQNTGLKNTPSEGQQN 2275
Score = 35.0 bits (79), Expect = 0.74
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 1974 QQNTGLKNTPSEGQPNTGLKNTPNEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 2029
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 2030 GLKNTPNEGQQNTGLKNTPSEGQQN 2054
Score = 34.7 bits (78), Expect = 0.96
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP ++ N T +N+ +K QNT
Sbjct: 1545 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNTASKGQQNT 1600
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1601 GLKNAPNERQQNTGLKNTPSEGQQN 1625
Score = 34.7 bits (78), Expect = 0.96
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 1844 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 1899
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1900 GLKNTPSGGQQNTGLKNTPNEGQQN 1924
Score = 34.7 bits (78), Expect = 0.96
Identities = 27/85 (31%), Positives = 38/85 (43%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + K Q K TP + N D K N+ N+R QNT
Sbjct: 1610 QQNTGLKNTPSEGQQNTGLKNSASKGQQNT--GLKNTPSEGQQNNDLK--NAPNERQQNT 1665
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1666 GLKNTPSEGQQNTGLKNTPSEGQQN 1690
Score = 33.9 bits (76), Expect = 1.6
Identities = 25/83 (30%), Positives = 38/83 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1909 QQNTGLKNTPNEGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 1964
Query: 183 GLQKVEPTTLQKARTSKTPQSLQ 251
GL+ Q TP Q
Sbjct: 1965 GLKNTPSEGQQNTGLKNTPSEGQ 1987
Score = 33.9 bits (76), Expect = 1.6
Identities = 26/92 (28%), Positives = 42/92 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ N+ QNT
Sbjct: 2286 QQNTGLKNTPSEGQPNTGLKNTPNEGQQNT--GLKNTPSEGQQN--TGLKNTPNEGQQNT 2341
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQDHQHLSQA 278
GL+ Q TP QQ++ ++A
Sbjct: 2342 GLKNTPSEGQQNTGLKNTPNEGQQNNDLKNKA 2373
Score = 33.5 bits (75), Expect = 2.1
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*-----------DTKA 149
+QNT L + +E + + G+ + P + Q + K TP ++ N +T
Sbjct: 1480 QQNTGLKNTPNERQQNTGLKNTPSEGQQNN--DLKNTPNERQQNTGLKNTASKGQQNTGL 1537
Query: 150 ENSINKRTQNTGLQKVEPTTLQKARTSKTPQSLQQD 257
+N+ N+R QNTGL+ Q TP QQ+
Sbjct: 1538 KNAPNERQQNTGLKNTPSEGQQNTGLKNTPSEGQQN 1573
Score = 33.1 bits (74), Expect = 2.8
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + K Q K TP ++ N T +N+ N+ QNT
Sbjct: 2065 QQNTGLKNTPSEGQQNTGLKNAANKGQQNT--GLKNTPNERQQN--TGLKNTPNEGQQNT 2120
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 2121 GLKNTPSEGQQNTGLKNTPSEGQQN 2145
Score = 32.7 bits (73), Expect = 3.7
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 2234 QQNTGLKNAANKGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 2289
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ TP QQ+
Sbjct: 2290 GLKNTPSEGQPNTGLKNTPNEGQQN 2314
Score = 32.3 bits (72), Expect = 4.8
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1688 QQNTGLKNTPSGGQQNTGLKNTPNERQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 1743
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1744 GLKNAANKGQQNTGLKNTPNEGQQN 1768
Score = 31.6 bits (70), Expect = 8.2
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP ++ N T +N+ ++ QNT
Sbjct: 1350 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNTPSEGQQNT 1405
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1406 GLKNTPIEGQQNTGLKNTPSEGQQN 1430
>pir||S31806 emp3 protein - malaria parasite (Plasmodium falciparum)
gi|9889|emb|CAA47935.1| emp3 [Plasmodium falciparum]
Length = 455
Score = 38.5 bits (88), Expect = 0.067
Identities = 26/85 (30%), Positives = 41/85 (47%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + P K Q K TP ++ N T +N+ N+R QNT
Sbjct: 157 QQNTGLKNAANKGQQNTGLKNTPSKGQQNT--GLKNTPNERQQN--TGLKNTPNERQQNT 212
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 213 GLKNTPSEGQQNNDLKNTPNERQQN 237
Score = 35.4 bits (80), Expect = 0.56
Identities = 26/85 (30%), Positives = 40/85 (46%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 53 QQNTGLKNTPNERQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 108
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 109 GLKNTPSEGQQNTGLKNTPIEGQQN 133
Score = 35.4 bits (80), Expect = 0.56
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + K Q K TP + + N T +N+ N+R QNT
Sbjct: 144 QQNTGLKNAANKGQQNTGLKNAANKGQQNT--GLKNTPSKGQQN--TGLKNTPNERQQNT 199
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQDH 260
GL+ Q TP QQ++
Sbjct: 200 GLKNTPNERQQNTGLKNTPSEGQQNN 225
Score = 33.9 bits (76), Expect = 1.6
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 248 QQNTGLKNAPNERQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 303
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ TP QQ+
Sbjct: 304 GLKNTPSEGQPNTGLKNTPNEGQQN 328
Score = 33.9 bits (76), Expect = 1.6
Identities = 26/92 (28%), Positives = 42/92 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ N+ QNT
Sbjct: 300 QQNTGLKNTPSEGQPNTGLKNTPNEGQQNT--GLKNTPSEGQQN--TGLKNTPNEGQQNT 355
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQDHQHLSQA 278
GL+ Q TP QQ++ ++A
Sbjct: 356 GLKNTPSEGQQNTGLKNTPNEGQQNNDLKNKA 387
Score = 33.5 bits (75), Expect = 2.1
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*-----------DTKA 149
+QNT L + +E + + G+ + P + Q + K TP ++ N +T
Sbjct: 196 QQNTGLKNTPNERQQNTGLKNTPSEGQQNN--DLKNTPNERQQNTGLKNTASKGQQNTGL 253
Query: 150 ENSINKRTQNTGLQKVEPTTLQKARTSKTPQSLQQD 257
+N+ N+R QNTGL+ Q TP QQ+
Sbjct: 254 KNAPNERQQNTGLKNTPSEGQQNTGLKNTPSEGQQN 289
Score = 31.6 bits (70), Expect = 8.2
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP ++ N T +N+ ++ QNT
Sbjct: 66 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNTPSEGQQNT 121
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 122 GLKNTPIEGQQNTGLKNTPSEGQQN 146
>gb|AAF01136.1| erythrocyte membrane protein 3 [Plasmodium falciparum]
Length = 629
Score = 36.2 bits (82), Expect = 0.33
Identities = 25/85 (29%), Positives = 40/85 (46%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + P + Q K TP ++ N T +N+ NK QNT
Sbjct: 58 QQNTGLKNAANKGQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNAANKGQQNT 113
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 114 GLKNTPNEGQQNTGLKNTPSEGQQN 138
Score = 35.0 bits (79), Expect = 0.74
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 266 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 321
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 322 GLKNTPNERQQNTGLKNTPNEGQQN 346
Score = 35.0 bits (79), Expect = 0.74
Identities = 26/92 (28%), Positives = 43/92 (46%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ N+ QNT
Sbjct: 318 QQNTGLKNTPNERQQNTGLKNTPNEGQQNT--GLKNTPSEGQQN--TGLKNTPNEGQQNT 373
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQDHQHLSQA 278
GL+ Q TP QQ++ ++A
Sbjct: 374 GLKNTPSEGQQNTGLKNTPNEGQQNNDLKNKA 405
Score = 34.7 bits (78), Expect = 0.96
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 201 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 256
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 257 GLKNTPNEGQQNTGLKNTPSEGQQN 281
Score = 34.3 bits (77), Expect = 1.3
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQ-RMTFNAKGTPKRKRTN*DTKAENSINKRTQN 179
+QNT L + +E + + DL KA++ + K TP + N T +N+ NK QN
Sbjct: 19 QQNTGLKNTPNEGQQN---NDLKNKASKGQQNTGLKNTPSEGQQN--TGLKNAANKGQQN 73
Query: 180 TGLQKVEPTTLQKARTSKTPQSLQQD 257
TGL+ Q TP QQ+
Sbjct: 74 TGLKNTPSEGQQNTGLKNTPNERQQN 99
Score = 33.9 bits (76), Expect = 1.6
Identities = 26/92 (28%), Positives = 42/92 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP + N T +N+ N+ QNT
Sbjct: 474 QQNTGLKNTPSEGQPNTGLKNTPNEGQQNT--GLKNTPSEGQQN--TGLKNTPNEGQQNT 529
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQDHQHLSQA 278
GL+ Q TP QQ++ ++A
Sbjct: 530 GLKNTPSEGQQNTGLKNTPNEGQQNNDLKNKA 561
Score = 33.9 bits (76), Expect = 1.6
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + K Q K TP + N T +N+ N+R QNT
Sbjct: 45 QQNTGLKNTPSEGQQNTGLKNAANKGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 100
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 101 GLKNAANKGQQNTGLKNTPNEGQQN 125
Score = 33.5 bits (75), Expect = 2.1
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQ-RMTFNAKGTPKRKRTN*DTKAENSINKRTQN 179
+QNT L + +E + + DL KA++ + K TP + N T +N+ NK QN
Sbjct: 383 QQNTGLKNTPNEGQQN---NDLKNKASKGQQNTGLKNTPSEGQQN--TGLKNAANKGQQN 437
Query: 180 TGLQKVEPTTLQKARTSKTPQSLQQD 257
TGL+ Q TP QQ+
Sbjct: 438 TGLKNTPSEGQQNTGLKNTPSEGQQN 463
Score = 33.1 bits (74), Expect = 2.8
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + K Q K TP ++ N T +N+ N+ QNT
Sbjct: 136 QQNTGLKNTPSEGQQNTGLKNAANKGQQNT--GLKNTPNERQQN--TGLKNTPNEGQQNT 191
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 192 GLKNTPSEGQQNTGLKNTPSEGQQN 216
Score = 32.7 bits (73), Expect = 3.7
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + P + Q K TP + N T +N+ NK QNT
Sbjct: 422 QQNTGLKNAANKGQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNAANKGQQNT 477
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ TP QQ+
Sbjct: 478 GLKNTPSEGQPNTGLKNTPNEGQQN 502
>gb|AAF01135.1| erythrocyte membrane protein 3 [Plasmodium falciparum]
Length = 1680
Score = 35.4 bits (80), Expect = 0.56
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + ++ + + G+ + K Q K TP + + N T +N+ N+R QNT
Sbjct: 1444 QQNTGLKNAANKGQQNTGLKNAANKGQQNT--GLKNTPSKGQQN--TGLKNTPNERQQNT 1499
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQDH 260
GL+ Q TP QQ++
Sbjct: 1500 GLKNTPNERQQNTGLKNTPSEGQQNN 1525
Score = 35.4 bits (80), Expect = 0.56
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1548 QQNTGLKNAPNERQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 1603
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q P QQ+
Sbjct: 1604 GLKNTASKGQQNTGLKNAPNERQQN 1628
Score = 35.4 bits (80), Expect = 0.56
Identities = 26/85 (30%), Positives = 40/85 (46%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + +E + + G+ + P + Q K TP + N T +N+ N+R QNT
Sbjct: 1353 QQNTGLKNTPNERQQNTGLKNTPSEGQQNT--GLKNTPSEGQQN--TGLKNTPNERQQNT 1408
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1409 GLKNTPSEGQQNTGLKNTPIEGQQN 1433
Score = 34.7 bits (78), Expect = 0.96
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP ++ N T +N+ +K QNT
Sbjct: 1561 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNTASKGQQNT 1616
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1617 GLKNAPNERQQNTGLKNTPSEGQQN 1641
Score = 33.5 bits (75), Expect = 2.1
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*-----------DTKA 149
+QNT L + +E + + G+ + P + Q + K TP ++ N +T
Sbjct: 1496 QQNTGLKNTPNERQQNTGLKNTPSEGQQNN--DLKNTPNERQQNTGLKNTASKGQQNTGL 1553
Query: 150 ENSINKRTQNTGLQKVEPTTLQKARTSKTPQSLQQD 257
+N+ N+R QNTGL+ Q TP QQ+
Sbjct: 1554 KNAPNERQQNTGLKNTPSEGQQNTGLKNTPSEGQQN 1589
Score = 31.6 bits (70), Expect = 8.2
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 3 KQNTLLVDIIHETKTS*GVTDLPRKATQRMTFNAKGTPKRKRTN*DTKAENSINKRTQNT 182
+QNT L + E + + G+ + P + Q K TP ++ N T +N+ ++ QNT
Sbjct: 1366 QQNTGLKNTPSEGQQNTGLKNTPSEGQQNT--GLKNTPNERQQN--TGLKNTPSEGQQNT 1421
Query: 183 GLQKVEPTTLQKARTSKTPQSLQQD 257
GL+ Q TP QQ+
Sbjct: 1422 GLKNTPIEGQQNTGLKNTPSEGQQN 1446
>gb|AAK48418.1| chloroquine resistance marker protein [Plasmodium falciparum]
Length = 3628
Score = 33.1 bits (74), Expect = 2.8
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 5/160 (3%)
Frame = +3
Query: 66 LPRKATQRMTFNAKGTPKRKRTN*DTKAENSINK-----RTQNTGLQKVEPTTLQKARTS 230
LP K + F K +TN K N I K +TQ+T Q +T K +++
Sbjct: 2759 LPTKRSNGDNFTPVIKGKENKTN-HNKENNVIKKSNVKSKTQST--QSKTHSTQSKTQST 2815
Query: 231 KTPQSLQQDHQHLSQAKSHLLMPYISA*FSTTNSRLKERDITQKTS*LCRTDK*IKDQST 410
++ Q H SQ+K+H + S T S + TQ+ K QST
Sbjct: 2816 QSKTHSSQSKTHSSQSKTHSSQSKTQSTQSKTQSTQSKTQSTQR-----------KTQST 2864
Query: 411 FSQSGSILSHPDFASSSASTLASLKM*HTHTPTQPTSLRS 530
S++ S S S + S K T + T+ T +S
Sbjct: 2865 QSKTHSTQSKTQSTQSKTHSTQS-KTKSTQSKTKSTQSKS 2903
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 502,542,488
Number of Sequences: 1393205
Number of extensions: 10268497
Number of successful extensions: 28161
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28027
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
