Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004243A_C01 KMC004243A_c01
(500 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190276.1| protein kinase - like protein; protein id: At3g... 93 1e-18
dbj|BAC22257.1| contains EST D23238(C2469)~kinase-like protein [... 78 6e-14
ref|NP_181050.1| putative protein kinase; protein id: At2g35050.... 60 1e-08
ref|NP_178075.1| hypothetical protein; protein id: At1g79570.1 [... 58 5e-08
ref|NP_173077.1| putative Ser/Thr protein kinase; protein id: At... 57 2e-07
>ref|NP_190276.1| protein kinase - like protein; protein id: At3g46920.1 [Arabidopsis
thaliana] gi|7487762|pir||T12956 hypothetical protein
T6H20.50 - Arabidopsis thaliana
gi|5541667|emb|CAB51173.1| putative protein [Arabidopsis
thaliana]
Length = 1171
Score = 93.2 bits (230), Expect = 1e-18
Identities = 56/115 (48%), Positives = 76/115 (65%), Gaps = 4/115 (3%)
Frame = +3
Query: 168 VKVSPEE---QQLQAVAEGLAASVLHSSSSSNLDLHARDASHHEDNNDGDVQNNLIDMQC 338
+K S EE Q+LQ VAEG+AASVL SS+ S + + + N+ G+V N Q
Sbjct: 794 LKGSEEEHIKQELQNVAEGVAASVLQSSTPSYHEPPIK-VDEYAFNSKGEVSRNDEMKQQ 852
Query: 339 NDKAQDVRSKIPEKANFGFQASD-VGALQVIKNGDLEELIELGSGTFGTVYHGKW 500
+ +D+R+++ E+ NFG+ SD + LQ+IK+ DLEEL ELGSGTFGTVYHGKW
Sbjct: 853 STHFKDIRNQLLERLNFGYSGSDSLDQLQIIKDSDLEELRELGSGTFGTVYHGKW 907
>dbj|BAC22257.1| contains EST D23238(C2469)~kinase-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 1270
Score = 77.8 bits (190), Expect = 6e-14
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +3
Query: 186 EQQLQAVAEGLAASVLHSSSSSNLDLHARDASHHEDNNDGDVQNNLIDMQCNDKAQDVRS 365
++QLQAVAEG+AASVL S + + D + D Q +ID K +D +
Sbjct: 921 KRQLQAVAEGVAASVLQSPFPEKPTVFSGDHT--------DKQGAVID----PKLEDAVN 968
Query: 366 KIPEKANFGFQA-SDVGALQVIKNGDLEELIELGSGTFGTVYHGKW 500
+K + G + D+ LQ+IKN DLEEL ELGSGTFGTVYHGKW
Sbjct: 969 NQSDKTSQGVKVLDDIDNLQIIKNSDLEELRELGSGTFGTVYHGKW 1014
>ref|NP_181050.1| putative protein kinase; protein id: At2g35050.1 [Arabidopsis
thaliana] gi|7488331|pir||T00486
serine/threonine-specific protein kinase homolog F19I3.28
- Arabidopsis thaliana gi|3033400|gb|AAC12844.1| putative
protein kinase [Arabidopsis thaliana]
Length = 1257
Score = 60.5 bits (145), Expect = 1e-08
Identities = 30/38 (78%), Positives = 32/38 (83%), Gaps = 2/38 (5%)
Frame = +3
Query: 393 FQASDVG--ALQVIKNGDLEELIELGSGTFGTVYHGKW 500
F A+D G +LQVIKN DLEEL ELGSGTFGTVYHGKW
Sbjct: 956 FMAADSGMRSLQVIKNDDLEELKELGSGTFGTVYHGKW 993
>ref|NP_178075.1| hypothetical protein; protein id: At1g79570.1 [Arabidopsis thaliana]
gi|25406595|pir||B96827 hypothetical protein T8K14.1
[imported] - Arabidopsis thaliana
gi|4835752|gb|AAD30219.1|AC007202_1 Is a member of the
PF|00069 Eukaryotic protein kinase family. ESTs
gb|T46484, gb|AF066875 and gb|N96237 come from this gene.
[Arabidopsis thaliana]
Length = 1248
Score = 58.2 bits (139), Expect = 5e-08
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +3
Query: 405 DVGALQVIKNGDLEELIELGSGTFGTVYHGKW 500
D LQ+IKN DLEEL ELGSGTFGTVYHGKW
Sbjct: 952 DYSGLQIIKNEDLEELRELGSGTFGTVYHGKW 983
>ref|NP_173077.1| putative Ser/Thr protein kinase; protein id: At1g16270.1
[Arabidopsis thaliana] gi|25518629|pir||F86297
hypothetical protein F3O9.7 - Arabidopsis thaliana
gi|4966348|gb|AAD34679.1|AC006341_7 Contains PF|00069
Eukaryotic protein kinase domain. ESTs gb|H37741,
gb|T43005 and gb|AI100340 come from this gene.
[Arabidopsis thaliana]
Length = 1147
Score = 56.6 bits (135), Expect = 2e-07
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3
Query: 405 DVGALQVIKNGDLEELIELGSGTFGTVYHGKW 500
D LQ+I N DLEEL ELGSGTFGTVYHGKW
Sbjct: 851 DTSGLQIIMNDDLEELKELGSGTFGTVYHGKW 882
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 427,678,388
Number of Sequences: 1393205
Number of extensions: 8727361
Number of successful extensions: 31885
Number of sequences better than 10.0: 176
Number of HSP's better than 10.0 without gapping: 29464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31664
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15072921604
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
