Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004234A_C01 KMC004234A_c01
(598 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA19605.1| ACC-oxidase [Vigna angularis] 145 5e-34
dbj|BAB83762.1| 1-aminocyclopropane-1-carboxylic acid oxidase [P... 144 9e-34
dbj|BAA94601.1| 1-aminocyclopropane-1-carboxylate oxidase [Popul... 143 1e-33
pir||S41880 1-aminocyclopropane-1-carboxylate oxidase [similarit... 142 2e-33
prf||1909340A Pch313 protein 142 2e-33
>dbj|BAA19605.1| ACC-oxidase [Vigna angularis]
Length = 310
Score = 145 bits (365), Expect = 5e-34
Identities = 70/88 (79%), Positives = 77/88 (86%)
Frame = -1
Query: 511 QVITHGKYKSVEHRVIAKTDGTRMSIASFYNPANDAVIYPAPALLESKALEAEPVYPKFV 332
+VIT+GKYKSVEHRVIA+TDGTRMSIASFYNPA DAVIYPAPALLE K + VYPKFV
Sbjct: 222 EVITNGKYKSVEHRVIARTDGTRMSIASFYNPAGDAVIYPAPALLERKTQVIDKVYPKFV 281
Query: 331 FEDYMKLYTKLKFQAKEPRFQAMKAVNS 248
FEDYM+LY LKFQ KEPRF+AMK VN+
Sbjct: 282 FEDYMRLYATLKFQPKEPRFEAMKGVNT 309
>dbj|BAB83762.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Phaseolus lunatus]
Length = 315
Score = 144 bits (363), Expect = 9e-34
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = -1
Query: 511 QVITHGKYKSVEHRVIAKTDGTRMSIASFYNPANDAVIYPAPALLESKALEAEPVYPKFV 332
+VIT+GKYKSVEHRVIA+TDGTRMSIASFYNP +DAVIYPAP LLE +A E +YPKFV
Sbjct: 222 EVITNGKYKSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPELLEKEAEEKAQLYPKFV 281
Query: 331 FEDYMKLYTKLKFQAKEPRFQAMKAVN 251
FEDYMKLY KLKFQAKEPRF+A KA N
Sbjct: 282 FEDYMKLYAKLKFQAKEPRFEAFKASN 308
>dbj|BAA94601.1| 1-aminocyclopropane-1-carboxylate oxidase [Populus euramericana]
Length = 319
Score = 143 bits (361), Expect = 1e-33
Identities = 68/88 (77%), Positives = 80/88 (90%)
Frame = -1
Query: 511 QVITHGKYKSVEHRVIAKTDGTRMSIASFYNPANDAVIYPAPALLESKALEAEPVYPKFV 332
+VIT+GKYKSVEHRVIA+TDGTRMS+ASFYNP ++AVIYPAPAL+E +A E + VYPKFV
Sbjct: 222 EVITNGKYKSVEHRVIAQTDGTRMSVASFYNPGSEAVIYPAPALVEKEAEEKKKVYPKFV 281
Query: 331 FEDYMKLYTKLKFQAKEPRFQAMKAVNS 248
F+DYMKLY LKFQAKEPRF+AMKAV +
Sbjct: 282 FDDYMKLYAGLKFQAKEPRFEAMKAVET 309
>pir||S41880 1-aminocyclopropane-1-carboxylate oxidase [similarity] - peach
gi|452671|emb|CAA54449.1|
1-aminocyclopropane-1-carboxylate oxidase [Prunus
persica] gi|3510500|gb|AAC33524.1|
1-aminocyclopropane-1-carboxylate oxidase; ACC oxidase
[Prunus armeniaca] gi|7108577|gb|AAF36483.1|AF129073_1
1-aminocyclopropane-1-carboxylate oxidase [Prunus
persica] gi|16588828|gb|AAL26910.1|AF319166_1
1-aminocyclopropane 1-carboxylic acid oxidase [Prunus
persica]
Length = 319
Score = 142 bits (359), Expect = 2e-33
Identities = 69/88 (78%), Positives = 77/88 (87%)
Frame = -1
Query: 511 QVITHGKYKSVEHRVIAKTDGTRMSIASFYNPANDAVIYPAPALLESKALEAEPVYPKFV 332
+VIT+GKYKSVEHRVIA+TDGTRMSIASFYNP +DAVIYPAP L+E +A E VYPKFV
Sbjct: 222 EVITNGKYKSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFV 281
Query: 331 FEDYMKLYTKLKFQAKEPRFQAMKAVNS 248
FEDYMKLY LKFQ KEPRF+AMKAV +
Sbjct: 282 FEDYMKLYAGLKFQPKEPRFEAMKAVET 309
>prf||1909340A Pch313 protein
Length = 319
Score = 142 bits (359), Expect = 2e-33
Identities = 69/88 (78%), Positives = 77/88 (87%)
Frame = -1
Query: 511 QVITHGKYKSVEHRVIAKTDGTRMSIASFYNPANDAVIYPAPALLESKALEAEPVYPKFV 332
+VIT+GKYKSVEHRVIA+TDGTRMSIASFYNP +DAVIYPAP L+E +A E VYPKFV
Sbjct: 222 EVITNGKYKSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFV 281
Query: 331 FEDYMKLYTKLKFQAKEPRFQAMKAVNS 248
FEDYMKLY LKFQ KEPRF+AMKAV +
Sbjct: 282 FEDYMKLYAGLKFQPKEPRFEAMKAVET 309
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,638,592
Number of Sequences: 1393205
Number of extensions: 10936481
Number of successful extensions: 24346
Number of sequences better than 10.0: 438
Number of HSP's better than 10.0 without gapping: 23568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24225
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
