Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004199A_C01 KMC004199A_c01
(544 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL23677.1| Serine/threonine Kinase [Persea americana] 135 2e-31
ref|NP_568878.1| serine/threonine protein kinase; protein id: At... 134 7e-31
dbj|BAA96929.1| serine/threonine protein kinase [Arabidopsis tha... 134 7e-31
ref|NP_196324.1| serine threonine protein kinase-like protein; p... 129 3e-29
gb|AAF86506.1|AF286050_1 CBL-interacting protein kinase 2 [Arabi... 129 3e-29
>gb|AAL23677.1| Serine/threonine Kinase [Persea americana]
Length = 453
Score = 135 bits (341), Expect = 2e-31
Identities = 65/98 (66%), Positives = 78/98 (79%)
Frame = -1
Query: 544 KPASVIISKLEEVCKSLCLKVKKKDGGFFKLESSKVGRKGILGIEAQIFEITPVLHLVEL 365
+PAS IISKLE++ K L LKVKKKD G KLE SK GRKG+L I+A+IF + P HLVE+
Sbjct: 346 QPASAIISKLEDIAKRLRLKVKKKDEGILKLEGSKEGRKGVLSIDAEIFVVNPSFHLVEV 405
Query: 364 KKSSGDTVEYQKLLKQDIRPALKDIVWTWQGEQPKQPQ 251
KKSSGDT+EYQKL QD+RPAL DIVW WQG+Q +Q +
Sbjct: 406 KKSSGDTLEYQKLWNQDMRPALTDIVWAWQGDQQQQQE 443
>ref|NP_568878.1| serine/threonine protein kinase; protein id: At5g58380.1, supported
by cDNA: gi_13249118, supported by cDNA: gi_13448028,
supported by cDNA: gi_20453091 [Arabidopsis thaliana]
gi|13249119|gb|AAK16685.1|AF295665_1 CBL-interacting
protein kinase 10 [Arabidopsis thaliana]
gi|13448029|gb|AAK26841.1|AF339143_1 SOS2-like protein
kinase PKS2 [Arabidopsis thaliana]
gi|20453092|gb|AAM19789.1| AT5g07070/T28J14_10
[Arabidopsis thaliana] gi|21703141|gb|AAM74510.1|
AT5g07070/T28J14_10 [Arabidopsis thaliana]
gi|21928023|gb|AAM78040.1| AT5g07070/T28J14_10
[Arabidopsis thaliana]
Length = 479
Score = 134 bits (337), Expect = 7e-31
Identities = 68/119 (57%), Positives = 86/119 (72%), Gaps = 12/119 (10%)
Frame = -1
Query: 544 KPASVIISKLEEVCKSLCLKVKKKDGGFFKLESSKVGRKGILGIEAQIFEITPVLHLVEL 365
KPASVIISKLEEV + L L ++K++ G FKLE K GRKGIL ++A+IF++TP HLVE+
Sbjct: 359 KPASVIISKLEEVAQRLKLSIRKREAGLFKLERLKEGRKGILSMDAEIFQVTPNFHLVEV 418
Query: 364 KKSSGDTVEYQKLLKQDIRPALKDIVWTWQGE------------QPKQPQHEVVQEEAL 224
KKS+GDT+EYQKL+ +D+RPAL DIVW WQGE Q +Q Q + QEE L
Sbjct: 419 KKSNGDTLEYQKLVAEDLRPALSDIVWVWQGEKDELTSQQETEYQQQQQQEQQEQEEPL 477
>dbj|BAA96929.1| serine/threonine protein kinase [Arabidopsis thaliana]
Length = 464
Score = 134 bits (337), Expect = 7e-31
Identities = 68/119 (57%), Positives = 86/119 (72%), Gaps = 12/119 (10%)
Frame = -1
Query: 544 KPASVIISKLEEVCKSLCLKVKKKDGGFFKLESSKVGRKGILGIEAQIFEITPVLHLVEL 365
KPASVIISKLEEV + L L ++K++ G FKLE K GRKGIL ++A+IF++TP HLVE+
Sbjct: 344 KPASVIISKLEEVAQRLKLSIRKREAGLFKLERLKEGRKGILSMDAEIFQVTPNFHLVEV 403
Query: 364 KKSSGDTVEYQKLLKQDIRPALKDIVWTWQGE------------QPKQPQHEVVQEEAL 224
KKS+GDT+EYQKL+ +D+RPAL DIVW WQGE Q +Q Q + QEE L
Sbjct: 404 KKSNGDTLEYQKLVAEDLRPALSDIVWVWQGEKDELTSQQETEYQQQQQQEQQEQEEPL 462
>ref|NP_196324.1| serine threonine protein kinase-like protein; protein id:
At5g07070.1, supported by cDNA: gi_9280635 [Arabidopsis
thaliana] gi|11346419|pir||T48478 serine/threonine
protein kinase-like protein - Arabidopsis thaliana
gi|7546685|emb|CAB87263.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
gi|9759563|dbj|BAB11165.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
Length = 456
Score = 129 bits (323), Expect = 3e-29
Identities = 62/105 (59%), Positives = 83/105 (79%)
Frame = -1
Query: 544 KPASVIISKLEEVCKSLCLKVKKKDGGFFKLESSKVGRKGILGIEAQIFEITPVLHLVEL 365
KPAS IISKL EV K L LK++K+ G FKLE K G+ GIL ++A+IF++TP HLVE+
Sbjct: 347 KPASEIISKLVEVAKCLKLKIRKQGAGLFKLERVKEGKNGILTMDAEIFQVTPTFHLVEV 406
Query: 364 KKSSGDTVEYQKLLKQDIRPALKDIVWTWQGEQPKQPQHEVVQEE 230
KK +GDT+EYQKL+++D+RPAL DIVW WQGE+ K+ Q ++Q+E
Sbjct: 407 KKCNGDTMEYQKLVEEDLRPALADIVWVWQGEKEKEEQ--LLQDE 449
>gb|AAF86506.1|AF286050_1 CBL-interacting protein kinase 2 [Arabidopsis thaliana]
Length = 456
Score = 129 bits (323), Expect = 3e-29
Identities = 62/105 (59%), Positives = 83/105 (79%)
Frame = -1
Query: 544 KPASVIISKLEEVCKSLCLKVKKKDGGFFKLESSKVGRKGILGIEAQIFEITPVLHLVEL 365
KPAS IISKL EV K L LK++K+ G FKLE K G+ GIL ++A+IF++TP HLVE+
Sbjct: 347 KPASEIISKLVEVAKCLKLKIRKQGAGLFKLERVKEGKNGILTMDAEIFQVTPTFHLVEV 406
Query: 364 KKSSGDTVEYQKLLKQDIRPALKDIVWTWQGEQPKQPQHEVVQEE 230
KK +GDT+EYQKL+++D+RPAL DIVW WQGE+ K+ Q ++Q+E
Sbjct: 407 KKCNGDTMEYQKLVEEDLRPALADIVWVWQGEKEKEEQ--LLQDE 449
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,239,331
Number of Sequences: 1393205
Number of extensions: 9135123
Number of successful extensions: 28874
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 27116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28819
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
