Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004182A_C01 KMC004182A_c01
(624 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL11575.1|AF424581_1 AT3g03470/T21P5_11 [Arabidopsis thaliana] 117 2e-25
ref|NP_186997.1| cytochrome p450, putative; protein id: At3g0347... 117 2e-25
dbj|BAC65385.1| putative cytochrome P450 [Oryza sativa (japonica... 115 4e-25
ref|NP_176673.1| cytochrome p450, putative; protein id: At1g6493... 112 4e-24
gb|AAB67854.1| cytochrome P450 [Arabidopsis thaliana] 112 5e-24
>gb|AAL11575.1|AF424581_1 AT3g03470/T21P5_11 [Arabidopsis thaliana]
Length = 511
Score = 117 bits (292), Expect = 2e-25
Identities = 54/75 (72%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
Frame = -3
Query: 604 DITGSKEIKMMPFGAGRRICPGYNLALMHLEYFVANLVWSFEWKVPEGGSVDLSEKQEF- 428
D+TG++EIKMMPFGAGRR+CPGY L+L+HLEY+VANLVW FEWK EG VDLSEKQ+F
Sbjct: 435 DMTGTREIKMMPFGAGRRMCPGYALSLLHLEYYVANLVWKFEWKCVEGEEVDLSEKQQFI 494
Query: 427 TMVMKYPLQAHLTPR 383
TMVMK P +A++ PR
Sbjct: 495 TMVMKNPFKANIYPR 509
>ref|NP_186997.1| cytochrome p450, putative; protein id: At3g03470.1, supported by
cDNA: gi_15983413 [Arabidopsis thaliana]
gi|6017105|gb|AAF01588.1|AC009895_9 putative cytochrome
P450 [Arabidopsis thaliana]
Length = 511
Score = 117 bits (292), Expect = 2e-25
Identities = 54/75 (72%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
Frame = -3
Query: 604 DITGSKEIKMMPFGAGRRICPGYNLALMHLEYFVANLVWSFEWKVPEGGSVDLSEKQEF- 428
D+TG++EIKMMPFGAGRR+CPGY L+L+HLEY+VANLVW FEWK EG VDLSEKQ+F
Sbjct: 435 DMTGTREIKMMPFGAGRRMCPGYALSLLHLEYYVANLVWKFEWKCVEGEEVDLSEKQQFI 494
Query: 427 TMVMKYPLQAHLTPR 383
TMVMK P +A++ PR
Sbjct: 495 TMVMKNPFKANIYPR 509
>dbj|BAC65385.1| putative cytochrome P450 [Oryza sativa (japonica cultivar-group)]
Length = 516
Score = 115 bits (289), Expect = 4e-25
Identities = 54/78 (69%), Positives = 63/78 (80%)
Frame = -3
Query: 619 EIEGLDITGSKEIKMMPFGAGRRICPGYNLALMHLEYFVANLVWSFEWKVPEGGSVDLSE 440
E E +D+TGSKEIKMMPFGAGRR+CPG LAL+HLEYFVANLVW F+W+ G VDL+E
Sbjct: 429 EGEDVDLTGSKEIKMMPFGAGRRVCPGMALALLHLEYFVANLVWEFDWREVAGDEVDLTE 488
Query: 439 KQEFTMVMKYPLQAHLTP 386
K EFT+VMK PL+A P
Sbjct: 489 KLEFTVVMKRPLKATAVP 506
>ref|NP_176673.1| cytochrome p450, putative; protein id: At1g64930.1 [Arabidopsis
thaliana] gi|25282571|pir||G96672 hypothetical protein
F13O11.23 [imported] - Arabidopsis thaliana
gi|5042428|gb|AAD38267.1|AC006193_23 Putative cytochrome
P450 [Arabidopsis thaliana]
Length = 511
Score = 112 bits (280), Expect = 4e-24
Identities = 52/79 (65%), Positives = 64/79 (80%)
Frame = -3
Query: 619 EIEGLDITGSKEIKMMPFGAGRRICPGYNLALMHLEYFVANLVWSFEWKVPEGGSVDLSE 440
E E +DITGS+ IKMMPFGAGRRICPG LA++HLEY+VAN+V F+WK EG VDL+E
Sbjct: 430 EEEAVDITGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVEGHEVDLTE 489
Query: 439 KQEFTMVMKYPLQAHLTPR 383
K EFT++MK+PL+A PR
Sbjct: 490 KVEFTVIMKHPLKAIAVPR 508
>gb|AAB67854.1| cytochrome P450 [Arabidopsis thaliana]
Length = 506
Score = 112 bits (279), Expect = 5e-24
Identities = 52/79 (65%), Positives = 64/79 (80%)
Frame = -3
Query: 619 EIEGLDITGSKEIKMMPFGAGRRICPGYNLALMHLEYFVANLVWSFEWKVPEGGSVDLSE 440
E E +D+TGS+ IKMMPFGAGRRICPG LA++HLEY+VAN+V F+WK EG VDL+E
Sbjct: 425 EEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVEGHEVDLTE 484
Query: 439 KQEFTMVMKYPLQAHLTPR 383
K EFT+VMK+PL+A PR
Sbjct: 485 KLEFTVVMKHPLKALAVPR 503
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 547,976,615
Number of Sequences: 1393205
Number of extensions: 12025435
Number of successful extensions: 34156
Number of sequences better than 10.0: 1187
Number of HSP's better than 10.0 without gapping: 32256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34037
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
