Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004177A_C01 KMC004177A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179437.1| putative protein kinase; protein id: At2g18470.... 52 6e-06
ref|NP_609573.1| CG15489-PA [Drosophila melanogaster] gi|1072874... 49 3e-05
ref|NP_566665.1| expressed protein; protein id: At3g20570.1, sup... 47 2e-04
ref|NP_173940.1| Pto kinase interactor, putative; protein id: At... 45 4e-04
ref|NP_724932.1| CG11763-PA [Drosophila melanogaster] gi|2162753... 45 6e-04
>ref|NP_179437.1| putative protein kinase; protein id: At2g18470.1 [Arabidopsis
thaliana] gi|25387125|pir||F84564 probable protein
kinase [imported] - Arabidopsis thaliana
gi|4218011|gb|AAD12219.1| putative protein kinase
[Arabidopsis thaliana] gi|20197810|gb|AAM15257.1|
putative protein kinase [Arabidopsis thaliana]
Length = 633
Score = 51.6 bits (122), Expect = 6e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = -2
Query: 519 SNSNSSNTNQTTTASPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSPP 340
S S SNTN +TT+SPP+P SPPSP P + + S PP D+ + P+P + P+PP
Sbjct: 16 SPSPPSNTN-STTSSPPAP-----SPPSPTPPQGDSSSSPPPDSTSPPAPQA----PNPP 65
Query: 339 NGA 331
N +
Sbjct: 66 NSS 68
Score = 36.2 bits (82), Expect = 0.26
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 453 SSSPPSPAPSKQEGQSPPPADTNTTPS--PASDHDHPSPPNGAAS 325
+SSP S P+ PP++TN+T S PA P+PP G +S
Sbjct: 2 ASSPESAPPTNSTSSPSPPSNTNSTTSSPPAPSPPSPTPPQGDSS 46
Score = 35.8 bits (81), Expect = 0.34
Identities = 19/53 (35%), Positives = 28/53 (51%), Gaps = 1/53 (1%)
Frame = -2
Query: 480 ASPPS-PQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSPPNGAAS 325
+SP S P ++S+S PSP + S PPA + +P+P SPP + S
Sbjct: 3 SSPESAPPTNSTSSPSPPSNTNSTTSSPPAPSPPSPTPPQGDSSSSPPPDSTS 55
Score = 33.5 bits (75), Expect = 1.7
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = -2
Query: 510 NSSNTNQTTTASPPSPQS--------SSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHD 355
+SS++ + SPP+PQ+ +S SPPS + G +T PS S
Sbjct: 44 DSSSSPPPDSTSPPAPQAPNPPNSSNNSPSPPSQGGGGERGNGGNNGGNDTPPSRGSPPS 103
Query: 354 HPSPPNG 334
PS NG
Sbjct: 104 PPSRSNG 110
>ref|NP_609573.1| CG15489-PA [Drosophila melanogaster] gi|10728741|gb|AAF53202.2|
CG15489-PA [Drosophila melanogaster]
Length = 300
Score = 49.3 bits (116), Expect = 3e-05
Identities = 29/61 (47%), Positives = 32/61 (51%)
Frame = -3
Query: 473 HRHHSRHHHHLLHQHLQSKKANLHHQQIQTQHHHQPVTMIILLLLMVLLHSLSAWEALLQ 294
H HHS HHH H QS++ LH QQ Q QHHHQ LLL LL A + LQ
Sbjct: 99 HPHHSHRHHH----HQQSQQQQLHQQQQQQQHHHQQQHQ--LLLQQQLLQQHVANSSPLQ 152
Query: 293 H 291
H
Sbjct: 153 H 153
>ref|NP_566665.1| expressed protein; protein id: At3g20570.1, supported by cDNA:
9965. [Arabidopsis thaliana] gi|11994144|dbj|BAB01165.1|
contains similarity to nodulin~gene_id:K10D20.11
[Arabidopsis thaliana]
Length = 203
Score = 46.6 bits (109), Expect = 2e-04
Identities = 34/94 (36%), Positives = 47/94 (49%), Gaps = 3/94 (3%)
Frame = -2
Query: 540 VIVLADRSNSNSSNTNQTTTASPPSPQSSSSSPPSPAPSKQEGQSPPPADT---NTTPSP 370
VIV+ADRS N+ T +SPPSP +PAPS + SPP + T P+P
Sbjct: 126 VIVMADRSG------NKNTASSPPSP--------APAPSGESAPSPPVSGTFEMTPAPTP 171
Query: 369 ASDHDHPSPPNGAASLFISLGGSAATFIASVLML 268
+ D P+ + S +L G+A +AS L L
Sbjct: 172 TTSEDTPNSAASSLSFVAALLGAA---LASTLFL 202
>ref|NP_173940.1| Pto kinase interactor, putative; protein id: At1g26150.1
[Arabidopsis thaliana] gi|25403034|pir||F86387 probable
Pto kinase interactor [imported] - Arabidopsis thaliana
gi|12321185|gb|AAG50687.1|AC079829_20 Pto kinase
interactor, putative [Arabidopsis thaliana]
Length = 760
Score = 45.4 bits (106), Expect = 4e-04
Identities = 23/52 (44%), Positives = 25/52 (47%), Gaps = 5/52 (9%)
Frame = -2
Query: 477 SPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHD-----HPSPPN 337
S P S SPP P K+ Q PPP TPSP S D HPSPP+
Sbjct: 208 STPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSKRPVHPSPPS 259
Score = 40.8 bits (94), Expect = 0.011
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 519 SNSNSSNTNQTTTASPPSPQSS-SSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSP 343
+N N T T S P P++ SS PP P+P PPP +P P PSP
Sbjct: 46 TNGNPPETTNTPAQSSPPPETPLSSPPPEPSPPSPSLTGPPPTTIPVSPPP-----EPSP 100
Query: 342 P 340
P
Sbjct: 101 P 101
Score = 38.1 bits (87), Expect = 0.069
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Frame = -2
Query: 519 SNSNSSNTNQTTTASPPSPQSSSSSPPSPAPSKQEGQSP------PPADTNTTPSP---- 370
S + S++ + SPPSP + PP P+P S PP+ + PSP
Sbjct: 242 SPPSPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKS 301
Query: 369 ASDHDHPSPPN------GAASLFISLGGSAATFIASVLML 268
S D+PSP N ++S IS+ I L+L
Sbjct: 302 VSGPDNPSPNNPTPVTDNSSSSGISIAAVVGVSIGVALVL 341
Score = 37.4 bits (85), Expect = 0.12
Identities = 20/52 (38%), Positives = 24/52 (45%), Gaps = 7/52 (13%)
Frame = -2
Query: 474 PPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTP-------SPASDHDHPSPP 340
PP S SPP PS + PPP +P +P SD +HPSPP
Sbjct: 169 PPKLVPPSHSPPRHLPSPPASEIPPPPRHLPSPPASERPSTPPSDSEHPSPP 220
Score = 35.0 bits (79), Expect = 0.58
Identities = 23/64 (35%), Positives = 32/64 (49%), Gaps = 11/64 (17%)
Frame = -2
Query: 483 TASPPSPQSSS----SSPPSP----APSKQEGQSPPPADTNTTPS---PASDHDHPSPPN 337
T SPPSP S SPPSP P + P P+++++ P+ P+S PSPP
Sbjct: 240 TPSPPSPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPR 299
Query: 336 GAAS 325
+ S
Sbjct: 300 KSVS 303
Score = 35.0 bits (79), Expect = 0.58
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 474 PPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSPPNGAA 328
PP + + SPPSP+ SK+ PP+ T P P P N ++
Sbjct: 233 PPGSKRPTPSPPSPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSS 281
Score = 35.0 bits (79), Expect = 0.58
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 483 TASPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSPPNGAASL 322
T +PP SS PP +P PP T+PSP + + P PP SL
Sbjct: 106 TEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPT--NPPPPPESPPSL 157
Score = 34.7 bits (78), Expect = 0.76
Identities = 22/58 (37%), Positives = 25/58 (42%), Gaps = 8/58 (13%)
Frame = -2
Query: 474 PPSPQSSSSSP----PSPAPSKQEGQSPPPAD----TNTTPSPASDHDHPSPPNGAAS 325
PP P+ S P PS PS E SPPP P P S PSPP+ + S
Sbjct: 192 PPPPRHLPSPPASERPSTPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDS 249
Score = 33.5 bits (75), Expect = 1.7
Identities = 16/46 (34%), Positives = 21/46 (44%)
Frame = -2
Query: 477 SPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSPP 340
SPP P + + PP+ S +S PP T P + PSPP
Sbjct: 99 SPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPP 144
Score = 33.5 bits (75), Expect = 1.7
Identities = 21/59 (35%), Positives = 28/59 (46%)
Frame = -2
Query: 519 SNSNSSNTNQTTTASPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSP 343
S + S T T P SP S PP P P+ ++PPPA+ ++P P S P P
Sbjct: 76 SPPSPSLTGPPPTTIPVSPPPEPSPPP-PLPT----EAPPPANPVSSPPPESSPPPPPP 129
Score = 32.3 bits (72), Expect = 3.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 480 ASPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASD-HDHPSPP 340
+SPP P + + P +P S +PPP + PA D +P PP
Sbjct: 122 SSPPPPPPTEAPPTTPITSPSPPTNPPPPPESPPSLPAPDPPSNPLPP 169
>ref|NP_724932.1| CG11763-PA [Drosophila melanogaster] gi|21627531|gb|AAF58795.2|
CG11763-PA [Drosophila melanogaster]
Length = 960
Score = 45.1 bits (105), Expect = 6e-04
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = -2
Query: 531 LADRSNSNSSNTNQTTTASPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHD- 355
L+ SNSNS+N++ ++++ S + + +P+ S+ SP P+ P PAS HD
Sbjct: 10 LSSESNSNSNNSSASSSSHQLSQSGAMGAEIAPSTSRSHSHSPTPSP----PVPASSHDQ 65
Query: 354 ----HPSPPNGAA 328
HPSPP A+
Sbjct: 66 PHPDHPSPPLNAS 78
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 473,971,656
Number of Sequences: 1393205
Number of extensions: 11370041
Number of successful extensions: 231181
Number of sequences better than 10.0: 4420
Number of HSP's better than 10.0 without gapping: 97503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182870
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
