Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004148A_C01 KMC004148A_c01
(410 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA85042.1| olfactory receptor protein ZF2B [Danio rerio] 36 0.099
ref|NP_611197.1| CG17287-PA [Drosophila melanogaster] gi|7302813... 35 0.29
ref|NP_113212.1| hypothetical protein [Guillardia theta] gi|2539... 34 0.38
gb|AAM11142.1| LD15472p [Drosophila melanogaster] 34 0.38
ref|NP_703760.1| hypothetical protein [Plasmodium falciparum 3D7... 34 0.38
>dbj|BAA85042.1| olfactory receptor protein ZF2B [Danio rerio]
Length = 324
Score = 36.2 bits (82), Expect = 0.099
Identities = 17/64 (26%), Positives = 34/64 (52%), Gaps = 7/64 (10%)
Frame = -1
Query: 173 VFCFHWFSFC-NFALL------FVVSFIPSLYFLVIYCFYLFLVV*LYWVFKSQLYQYSI 15
+FC H+FS +F L+ F+ F+P Y ++ +++ V + WVF + + +++
Sbjct: 103 MFCVHFFSTVQSFTLVVLSYDRFIAIFLPLRYHAIVNYTFMYFVFSIIWVFNASIVAFAV 162
Query: 14 SYFT 3
S T
Sbjct: 163 SLIT 166
>ref|NP_611197.1| CG17287-PA [Drosophila melanogaster] gi|7302813|gb|AAF57887.1|
CG17287-PA [Drosophila melanogaster]
Length = 338
Score = 34.7 bits (78), Expect = 0.29
Identities = 26/86 (30%), Positives = 37/86 (42%), Gaps = 2/86 (2%)
Frame = -1
Query: 311 IGSQTYGGALNVSANIWCIPFSTNLSLCSSCHSGVL--EPFLPMLGSCVFCFHWFSFCNF 138
I + T G + W I C +CH VL + P + +CV FH F +
Sbjct: 115 IATCTIDGLVRYCKTCWIIK-PDRAHHCRTCHMCVLKMDHHCPWIVNCVH-FHNFKY--- 169
Query: 137 ALLFVVSFIPSLYFLVIYCFYLFLVV 60
FI L++ +YCFYLF V+
Sbjct: 170 -------FILFLFYAEVYCFYLFCVM 188
>ref|NP_113212.1| hypothetical protein [Guillardia theta] gi|25397033|pir||D90136
hypothetical protein orf272 [imported] - Guillardia
theta nucleomorph gi|13794400|gb|AAK39777.1|AF083031_134
hypothetical protein [Guillardia theta]
Length = 272
Score = 34.3 bits (77), Expect = 0.38
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = -1
Query: 275 SANIWCIPFSTNLSLCSSCHSGVLEPFLPMLGSCVFCFHWFSFCNFALLFVVSFIPSLYF 96
S +IW P +++ S+C SC+ + P LG C+ S N+ + F+ F
Sbjct: 98 SCSIWRPPRASHCSVCDSCNM-QFDHHCPWLGKCI------SLKNYRIFFL--------F 142
Query: 95 LVIYCFYLFLVV*LYWVFKSQLY----QYSISYF 6
L + F++ ++ ++++ + Y QYS F
Sbjct: 143 LSLLTFFIMSILSIFFINSKKTYFMNNQYSFKLF 176
>gb|AAM11142.1| LD15472p [Drosophila melanogaster]
Length = 1593
Score = 34.3 bits (77), Expect = 0.38
Identities = 26/103 (25%), Positives = 45/103 (43%)
Frame = +3
Query: 24 LIELGFKYPVKSYN*EKIETVNDEEI*TWNETNNKQKSKITKGKPMKTKDTGSQHWQKRF 203
LIE + Y V E+I++VN T N TNN + TK KP+ D ++
Sbjct: 1143 LIENSYSYQVPDN--EQIDSVNSYNNKTQNVTNNGIEKANTKNKPVPLHDPPTKKASTVG 1200
Query: 204 KHPTVAGGTQAEIRGERNAPDVSGHIQSTTISLRPYCSPDLHN 332
++ G A ++ A + S ++ ++ +P P +N
Sbjct: 1201 MFGSILGKAAAAVQSATQAVNQSASSVASVVAQKPTIVPRTNN 1243
>ref|NP_703760.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23498421|emb|CAD50372.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 1901
Score = 34.3 bits (77), Expect = 0.38
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 188 MLGSCVFCFHWFSFCNFALLFVVSFIPSLYFLVIYCFYLF 69
+LGSC +C H F+F ++ Y+L IYC Y +
Sbjct: 1829 LLGSCPYCKHAFNFFTRTCNICQRYVHICYYLFIYCTYKY 1868
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 334,874,955
Number of Sequences: 1393205
Number of extensions: 7007654
Number of successful extensions: 23543
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 22627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23490
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 7023606888
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
