Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004137A_C01 KMC004137A_c01
(497 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09572 cdc2-like protein kinase cdc2MsC - alfalfa gi|180614... 244 4e-64
dbj|BAB92875.1| cell division cycle 2-like protein kinase 5,Chol... 236 1e-61
ref|NP_201301.1| Cyclin-dependent kinase C;2; protein id: At5g64... 233 7e-61
ref|NP_196589.1| Cyclin-dependent kinase C;1; protein id: At5g10... 233 1e-60
gb|AAL32527.1| cdc2-like protein kinase [Arabidopsis thaliana] g... 232 2e-60
>pir||T09572 cdc2-like protein kinase cdc2MsC - alfalfa
gi|1806140|emb|CAA65979.1| cdc2MsC [Medicago sativa]
Length = 509
Score = 244 bits (623), Expect = 4e-64
Identities = 119/130 (91%), Positives = 125/130 (95%)
Frame = +1
Query: 106 GQLNVIESATWGSRSVDCFEKLEQIGEGTYGQVFMAKEIETGEIVALKRIRMDNEREGFP 285
GQLNVIES + GSRSVDCFEKLEQIGEGTYG V+MA+EIETGEIVALK+IRMDNEREGFP
Sbjct: 7 GQLNVIESPSRGSRSVDCFEKLEQIGEGTYGMVYMAREIETGEIVALKKIRMDNEREGFP 66
Query: 286 ITAIREIKILKKLHHENVIELKEIVTSPGPERDGQGRPDGNKYKGGIYMVFEYMDHDLTG 465
ITAIREIKILKKLHHENVI+LKEIVTSPGPE+D QGRPDGNKYKGGIYMVFEYMDHDLTG
Sbjct: 67 ITAIREIKILKKLHHENVIKLKEIVTSPGPEKDDQGRPDGNKYKGGIYMVFEYMDHDLTG 126
Query: 466 LADRPEMRFT 495
LADRP MRFT
Sbjct: 127 LADRPGMRFT 136
>dbj|BAB92875.1| cell division cycle 2-like protein kinase 5,Cholinesterase-related
cell division controller [Oryza sativa (japonica
cultivar-group)]
Length = 474
Score = 236 bits (601), Expect = 1e-61
Identities = 116/134 (86%), Positives = 124/134 (91%), Gaps = 1/134 (0%)
Frame = +1
Query: 97 AMAGQLNVIESATWGSRSVDCFEKLEQIGEGTYGQVFMAKEIETGEIVALKRIRMDNERE 276
A GQLN+ ES +WGSRSVDCFEKLEQIGEGTYGQV+MAKE ET EIVALK+IRMDNERE
Sbjct: 4 AAPGQLNLDESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKETETNEIVALKKIRMDNERE 63
Query: 277 GFPITAIREIKILKKLHHENVIELKEIVTSPGPERDGQGRP-DGNKYKGGIYMVFEYMDH 453
GFPITAIREIKILKKLHH+NVI+LKEIVTSPGPERD QG+P +GNKYKG IYMVFEYMDH
Sbjct: 64 GFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIEGNKYKGSIYMVFEYMDH 123
Query: 454 DLTGLADRPEMRFT 495
DLTGLADRP MRFT
Sbjct: 124 DLTGLADRPGMRFT 137
>ref|NP_201301.1| Cyclin-dependent kinase C;2; protein id: At5g64960.1, supported by
cDNA: gi_13430443, supported by cDNA: gi_17064745
[Arabidopsis thaliana] gi|8843760|dbj|BAA97308.1|
cdc2-like protein kinase [Arabidopsis thaliana]
gi|13430444|gb|AAK25844.1|AF360134_1 putative cdc2
protein kinase [Arabidopsis thaliana]
gi|14532732|gb|AAK64067.1| putative cdc2 protein kinase
[Arabidopsis thaliana]
Length = 513
Score = 233 bits (595), Expect = 7e-61
Identities = 116/135 (85%), Positives = 123/135 (90%), Gaps = 1/135 (0%)
Frame = +1
Query: 94 AAMAGQLNVIESAT-WGSRSVDCFEKLEQIGEGTYGQVFMAKEIETGEIVALKRIRMDNE 270
AA GQLN+ E WGSRSVDCFEKLEQIGEGTYGQV+MAKEI+TGEIVALK+IRMDNE
Sbjct: 3 AAAFGQLNLEEPPPIWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNE 62
Query: 271 REGFPITAIREIKILKKLHHENVIELKEIVTSPGPERDGQGRPDGNKYKGGIYMVFEYMD 450
REGFPITAIREIKILKKLHHENVI LKEIVTSPG +RD QG+PD NKYKGGIYMVFEYMD
Sbjct: 63 REGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMD 122
Query: 451 HDLTGLADRPEMRFT 495
HDLTGLADRP +RFT
Sbjct: 123 HDLTGLADRPGLRFT 137
>ref|NP_196589.1| Cyclin-dependent kinase C;1; protein id: At5g10270.1, supported by
cDNA: gi_14030692 [Arabidopsis thaliana]
gi|11346412|pir||T50815 cdc2-like protein kinase -
Arabidopsis thaliana gi|8953408|emb|CAB96683.1|
cdc2-like protein kinase [Arabidopsis thaliana]
gi|14030693|gb|AAK53021.1|AF375437_1 AT5g10270/F18D22_40
[Arabidopsis thaliana] gi|21464557|gb|AAM52233.1|
AT5g10270/F18D22_40 [Arabidopsis thaliana]
Length = 505
Score = 233 bits (593), Expect = 1e-60
Identities = 115/134 (85%), Positives = 123/134 (90%), Gaps = 1/134 (0%)
Frame = +1
Query: 97 AMAGQLNVIESAT-WGSRSVDCFEKLEQIGEGTYGQVFMAKEIETGEIVALKRIRMDNER 273
A GQLN+ E WGSRSVDCFEKLEQIGEGTYGQV+MAKEI+TGEIVALK+IRMDNER
Sbjct: 4 ASFGQLNLEEPPPIWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNER 63
Query: 274 EGFPITAIREIKILKKLHHENVIELKEIVTSPGPERDGQGRPDGNKYKGGIYMVFEYMDH 453
EGFPITAIREIKILKKLHHENVI+LKEIVTSPG +RD QG+PD NKYKGGIYMVFEYMDH
Sbjct: 64 EGFPITAIREIKILKKLHHENVIQLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDH 123
Query: 454 DLTGLADRPEMRFT 495
DLTGLADRP +RFT
Sbjct: 124 DLTGLADRPGLRFT 137
>gb|AAL32527.1| cdc2-like protein kinase [Arabidopsis thaliana]
gi|27311919|gb|AAO00925.1| cdc2-like protein kinase
[Arabidopsis thaliana]
Length = 513
Score = 232 bits (592), Expect = 2e-60
Identities = 115/135 (85%), Positives = 123/135 (90%), Gaps = 1/135 (0%)
Frame = +1
Query: 94 AAMAGQLNVIESAT-WGSRSVDCFEKLEQIGEGTYGQVFMAKEIETGEIVALKRIRMDNE 270
AA GQLN+ E WGSRSVDC+EKLEQIGEGTYGQV+MAKEI+TGEIVALK+IRMDNE
Sbjct: 3 AAAFGQLNLEEPPPIWGSRSVDCYEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNE 62
Query: 271 REGFPITAIREIKILKKLHHENVIELKEIVTSPGPERDGQGRPDGNKYKGGIYMVFEYMD 450
REGFPITAIREIKILKKLHHENVI LKEIVTSPG +RD QG+PD NKYKGGIYMVFEYMD
Sbjct: 63 REGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMD 122
Query: 451 HDLTGLADRPEMRFT 495
HDLTGLADRP +RFT
Sbjct: 123 HDLTGLADRPGLRFT 137
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 443,881,199
Number of Sequences: 1393205
Number of extensions: 9781905
Number of successful extensions: 34157
Number of sequences better than 10.0: 3919
Number of HSP's better than 10.0 without gapping: 31714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32657
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
