Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004131A_C01 KMC004131A_c01
(466 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567919.1| peroxidase, putative; protein id: At4g33420.1, ... 147 7e-35
sp|Q9SZB9|PE47_ARATH Peroxidase 47 precursor (Atperox P47) (ATP3... 147 7e-35
gb|AAB02926.1| peroxidase [Linum usitatissimum] 76 2e-13
gb|AAK52084.1| peroxidase [Nicotiana tabacum] 74 6e-13
pir||S55035 peroxidase (EC 1.11.1.7) precursor - parsley gi|5592... 74 8e-13
>ref|NP_567919.1| peroxidase, putative; protein id: At4g33420.1, supported by cDNA:
32346., supported by cDNA: gi_17530546 [Arabidopsis
thaliana]
Length = 325
Score = 147 bits (370), Expect = 7e-35
Identities = 72/98 (73%), Positives = 81/98 (82%)
Frame = -2
Query: 465 LSQVDPTLDTGFAKTLSKTCSSGDNAQQPFDATSNDFDNVYFNALQRKNGVLTSDQTLFA 286
L+ D +LD+ FA TLSKTCS+GDNA+QPFDAT NDFDN YFNALQ K+GVL SDQTLF
Sbjct: 216 LTVPDSSLDSTFANTLSKTCSAGDNAEQPFDATRNDFDNAYFNALQMKSGVLFSDQTLFN 275
Query: 285 SPQTRNFVNGYAFNQAMFFFDFQRAMVKMGQLDVKLDS 172
+P+TRN VNGYA NQA FFFDFQ+AM KM LDVKL S
Sbjct: 276 TPRTRNLVNGYALNQAKFFFDFQQAMRKMSNLDVKLGS 313
>sp|Q9SZB9|PE47_ARATH Peroxidase 47 precursor (Atperox P47) (ATP32)
gi|7433093|pir||T05993 probable peroxidase (EC 1.11.1.7)
F17M5.180 - Arabidopsis thaliana
gi|4490309|emb|CAB38800.1| peroxidase ATP17a-like
protein [Arabidopsis thaliana]
gi|7270290|emb|CAB80059.1| peroxidase ATP17a-like
protein [Arabidopsis thaliana]
gi|17530547|gb|AAL40837.1|AF451951_1 class III
peroxidase ATP32 [Arabidopsis thaliana]
Length = 314
Score = 147 bits (370), Expect = 7e-35
Identities = 72/98 (73%), Positives = 81/98 (82%)
Frame = -2
Query: 465 LSQVDPTLDTGFAKTLSKTCSSGDNAQQPFDATSNDFDNVYFNALQRKNGVLTSDQTLFA 286
L+ D +LD+ FA TLSKTCS+GDNA+QPFDAT NDFDN YFNALQ K+GVL SDQTLF
Sbjct: 205 LTVPDSSLDSTFANTLSKTCSAGDNAEQPFDATRNDFDNAYFNALQMKSGVLFSDQTLFN 264
Query: 285 SPQTRNFVNGYAFNQAMFFFDFQRAMVKMGQLDVKLDS 172
+P+TRN VNGYA NQA FFFDFQ+AM KM LDVKL S
Sbjct: 265 TPRTRNLVNGYALNQAKFFFDFQQAMRKMSNLDVKLGS 302
>gb|AAB02926.1| peroxidase [Linum usitatissimum]
Length = 355
Score = 75.9 bits (185), Expect = 2e-13
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = -2
Query: 453 DPTLDTGFAKTLSKTCSSGDNAQQPFDATS-NDFDNVYFNALQRKNGVLTSDQTLFASPQ 277
DP++D FAK L TC D S N FDN Y+ L + G+ TSDQ L+ +
Sbjct: 224 DPSMDQTFAKNLKATCPQAATTDNIVDIRSPNVFDNKYYVDLMNRQGLFTSDQDLYTDSR 283
Query: 276 TRNFVNGYAFNQAMFFFDFQRAMVKMGQLDV 184
TR V +A NQ +FF F AM+KMGQ+ V
Sbjct: 284 TRGIVTSFAINQTLFFEKFVVAMIKMGQISV 314
>gb|AAK52084.1| peroxidase [Nicotiana tabacum]
Length = 354
Score = 74.3 bits (181), Expect = 6e-13
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = -2
Query: 453 DPTLDTGFAKTLSKTCSSGDNAQQP-FDATS-NDFDNVYFNALQRKNGVLTSDQTLFASP 280
DP++D FA L TC + ++ D S N FDN Y+ L + G+ TSDQ L+
Sbjct: 224 DPSMDKTFANNLKNTCPTSNSTNTTVLDIRSPNKFDNKYYVDLMNRQGLFTSDQDLYTDR 283
Query: 279 QTRNFVNGYAFNQAMFFFDFQRAMVKMGQLDV 184
+TR V +A N+++FF +F +M+KMGQL+V
Sbjct: 284 RTRGIVTSFAINESLFFEEFVNSMIKMGQLNV 315
>pir||S55035 peroxidase (EC 1.11.1.7) precursor - parsley
gi|559235|gb|AAA98491.1| anionic peroxidase
Length = 363
Score = 73.9 bits (180), Expect = 8e-13
Identities = 40/91 (43%), Positives = 50/91 (53%), Gaps = 1/91 (1%)
Frame = -2
Query: 453 DPTLDTGFAKTLSKTCSSGDNAQQPFDA-TSNDFDNVYFNALQRKNGVLTSDQTLFASPQ 277
DPT+D FA+ L C N P D T N FDN Y+ L + G+ TSDQ LF +
Sbjct: 235 DPTMDAEFAQDLKNICPPNSNNTTPQDVITPNLFDNSYYVDLINRQGLFTSDQDLFTDTR 294
Query: 276 TRNFVNGYAFNQAMFFFDFQRAMVKMGQLDV 184
T+ V +A +Q +FF F AM KMGQL V
Sbjct: 295 TKEIVQDFASDQELFFEKFVLAMTKMGQLSV 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 398,743,197
Number of Sequences: 1393205
Number of extensions: 7532642
Number of successful extensions: 22004
Number of sequences better than 10.0: 375
Number of HSP's better than 10.0 without gapping: 21268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21875
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 12291312054
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
