Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004129A_C01 KMC004129A_c01
(653 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA92697.1| type 2A protein phosphatase-1 [Vicia faba] 194 9e-49
emb|CAC11129.1| protein phosphatase 2A [Fagus sylvatica] 190 1e-47
dbj|BAA92698.1| type 2A protein phosphatase-2 [Vicia faba] 189 2e-47
sp|Q9XGT7|P2A3_ORYSA Serine/threonine protein phosphatase PP2A-3... 189 2e-47
ref|NP_177154.1| serine/threonine protein phosphatase type 2A (P... 189 3e-47
>dbj|BAA92697.1| type 2A protein phosphatase-1 [Vicia faba]
Length = 306
Score = 194 bits (493), Expect = 9e-49
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -2
Query: 652 GYTFGQDIAAQFHHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRYGNMAAIL 473
GYTFGQDIAAQF+HTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYR GNMAAIL
Sbjct: 214 GYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAIL 273
Query: 472 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 374
EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL
Sbjct: 274 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
>emb|CAC11129.1| protein phosphatase 2A [Fagus sylvatica]
Length = 306
Score = 190 bits (483), Expect = 1e-47
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -2
Query: 652 GYTFGQDIAAQFHHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRYGNMAAIL 473
GYTFGQDIAAQF+HTNGL+LISRAHQLVMEG+NWCQ+KNVVTVFSAPNYCYR GNMAAIL
Sbjct: 214 GYTFGQDIAAQFNHTNGLTLISRAHQLVMEGFNWCQDKNVVTVFSAPNYCYRCGNMAAIL 273
Query: 472 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 374
EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL
Sbjct: 274 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
>dbj|BAA92698.1| type 2A protein phosphatase-2 [Vicia faba]
Length = 306
Score = 189 bits (481), Expect = 2e-47
Identities = 89/93 (95%), Positives = 91/93 (97%)
Frame = -2
Query: 652 GYTFGQDIAAQFHHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRYGNMAAIL 473
GYTFGQDIA+QF+HTNGLSLISRAHQLVMEGYNW QEKNVVTVFSAPNYCYR GNMAAIL
Sbjct: 214 GYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWAQEKNVVTVFSAPNYCYRCGNMAAIL 273
Query: 472 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 374
EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL
Sbjct: 274 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
>sp|Q9XGT7|P2A3_ORYSA Serine/threonine protein phosphatase PP2A-3 catalytic subunit
gi|5231210|gb|AAD41126.1|AF159061_1 serine/threonine
protein phosphatase PP2A-3 catalytic subunit [Oryza
sativa (indica cultivar-group)]
Length = 307
Score = 189 bits (481), Expect = 2e-47
Identities = 88/93 (94%), Positives = 91/93 (97%)
Frame = -2
Query: 652 GYTFGQDIAAQFHHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRYGNMAAIL 473
GYTFGQDIA QF+HTNGLSLISRAHQLVMEG+NWCQ+KNVVTVFSAPNYCYR GNMAAIL
Sbjct: 215 GYTFGQDIAQQFNHTNGLSLISRAHQLVMEGFNWCQDKNVVTVFSAPNYCYRCGNMAAIL 274
Query: 472 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 374
EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL
Sbjct: 275 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 307
>ref|NP_177154.1| serine/threonine protein phosphatase type 2A (PP2A); protein id:
At1g69960.1, supported by cDNA: gi_1912285 [Arabidopsis
thaliana] gi|12643532|sp|O04951|P2A5_ARATH
Serine/threonine protein phosphatase PP2A-5 catalytic
subunit gi|25752336|pir||B96722 phosphoprotein
phosphatase (EC 3.1.3.16) 2A catalytic chain F20P5.30
[similarity] - Arabidopsis thaliana
gi|1912286|gb|AAC49668.1| type 2A serine/threonine
protein phosphatase gi|2194141|gb|AAB61116.1| Match to
Arabidopsis protein phosphatase PP2A (gb|U39568). EST
gb|T41959 comes from this gene. [Arabidopsis thaliana]
gi|12325235|gb|AAG52565.1|AC010675_13 serine/threonine
protein phosphatase (type 2A); 2836-4455 [Arabidopsis
thaliana]
Length = 307
Score = 189 bits (480), Expect = 3e-47
Identities = 87/93 (93%), Positives = 91/93 (97%)
Frame = -2
Query: 652 GYTFGQDIAAQFHHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRYGNMAAIL 473
GYTFGQDIA QF+HTNGLSLISRAHQLVMEG+NWCQEKNVVTVFSAPNYCYR GNMAAIL
Sbjct: 215 GYTFGQDIATQFNHTNGLSLISRAHQLVMEGFNWCQEKNVVTVFSAPNYCYRCGNMAAIL 274
Query: 472 EIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 374
EIGENMDQNFLQFDPAPRQ+EP+TTRKTPDYFL
Sbjct: 275 EIGENMDQNFLQFDPAPRQVEPETTRKTPDYFL 307
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 580,318,719
Number of Sequences: 1393205
Number of extensions: 13116628
Number of successful extensions: 30971
Number of sequences better than 10.0: 476
Number of HSP's better than 10.0 without gapping: 29976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30896
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 28144814643
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
