Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004115A_C01 KMC004115A_c01
(694 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P31531|1A1C_SOYBN 1-aminocyclopropane-1-carboxylate synthase ... 137 1e-31
pir||S26214 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1... 131 8e-30
gb|AAL35745.1| 1-aminocyclopropanecarboxylic acid synthase [Medi... 130 2e-29
pir||T06253 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1... 120 2e-26
emb|CAD21842.1| ACC synthase 1.1 [Fagus sylvatica] 111 8e-24
>sp|P31531|1A1C_SOYBN 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
(S-adenosyl-L-methionine methylthioadenosine-lyase)
gi|99885|pir||S25002 1-aminocyclopropane-1-carboxylate
synthase (EC 4.4.1.14) - soybean
gi|18558|emb|CAA47474.1| 1-aminocyclopropane
1-carboxylate synthase [Glycine max]
gi|1090777|prf||2019442A aminocyclopropane carboxylate
synthase
Length = 484
Score = 137 bits (345), Expect = 1e-31
Identities = 63/76 (82%), Positives = 68/76 (88%)
Frame = -1
Query: 694 EPGWFRVCYANMDDRAVQVSLQRIRAFVLQNVEVKVPEKRPCWQSNLRLSFKTRRFDDIM 515
EPGWFRVCYANMDD AVQ++LQRIR FVLQN E+ VP K+ CW SNLRLS KTRRFDDIM
Sbjct: 408 EPGWFRVCYANMDDMAVQIALQRIRNFVLQNKEIMVPNKKHCWHSNLRLSLKTRRFDDIM 467
Query: 514 MSPHSPMPQSPLVKAT 467
MSPHSP+PQSPLVKAT
Sbjct: 468 MSPHSPIPQSPLVKAT 483
>pir||S26214 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (clone
pAIM-1) - mung bean gi|22070|emb|CAA77688.1|
1-aminocyclopropane 1-carboxylate synthase [Vigna
radiata]
Length = 484
Score = 131 bits (330), Expect = 8e-30
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = -1
Query: 694 EPGWFRVCYANMDDRAVQVSLQRIRAFVLQNVEVKVPEKRPCWQSNLRLSFKTRRFDDIM 515
EPGWFRVCYANMDD AVQ++LQRIR FVLQN EV V K+ CW SNLRLS KTRRFDDI
Sbjct: 408 EPGWFRVCYANMDDMAVQIALQRIRNFVLQNKEVVVSNKKHCWHSNLRLSLKTRRFDDIT 467
Query: 514 MSPHSPMPQSPLVKAT 467
MSPHSP+PQSP+VKAT
Sbjct: 468 MSPHSPLPQSPMVKAT 483
>gb|AAL35745.1| 1-aminocyclopropanecarboxylic acid synthase [Medicago truncatula]
Length = 487
Score = 130 bits (327), Expect = 2e-29
Identities = 64/80 (80%), Positives = 70/80 (87%), Gaps = 3/80 (3%)
Frame = -1
Query: 694 EPGWFRVCYANMDDRAVQVSLQRIRAFVLQN-VEVKVPEK--RPCWQSNLRLSFKTRRFD 524
EPGWFRVCYANMDDR VQ++LQRIR+FV+QN EV V EK +PCW SNLRLS KTRRFD
Sbjct: 408 EPGWFRVCYANMDDRDVQIALQRIRSFVVQNNKEVMVSEKNTKPCWHSNLRLSLKTRRFD 467
Query: 523 DIMMSPHSPMPQSPLVKATT 464
DI+MSPHSP PQSPLVKATT
Sbjct: 468 DIVMSPHSPFPQSPLVKATT 487
>pir||T06253 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) 2 - garden
pea gi|2360989|gb|AAD04199.1|
1-aminocyclopropane-1-carboxylate synthase; ACC synthase
[Pisum sativum]
Length = 487
Score = 120 bits (300), Expect = 2e-26
Identities = 58/80 (72%), Positives = 65/80 (80%), Gaps = 3/80 (3%)
Frame = -1
Query: 694 EPGWFRVCYANMDDRAVQVSLQRIRAFVLQNVEVKV---PEKRPCWQSNLRLSFKTRRFD 524
EPGWFRVCYANMDDR VQ++LQRIR+FV QN + + +P W SNLRLS K RRFD
Sbjct: 408 EPGWFRVCYANMDDRDVQIALQRIRSFVTQNNKEAMGSDKNSKPYWHSNLRLSLKPRRFD 467
Query: 523 DIMMSPHSPMPQSPLVKATT 464
DIMMSPHSP+PQSPLVKATT
Sbjct: 468 DIMMSPHSPIPQSPLVKATT 487
>emb|CAD21842.1| ACC synthase 1.1 [Fagus sylvatica]
Length = 241
Score = 111 bits (278), Expect = 8e-24
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 5/79 (6%)
Frame = -1
Query: 691 PGWFRVCYANMDDRAVQVSLQRIRAFVLQNVEVKVPEKRPCWQSNLRLSFKTRRFDDI-- 518
PGWFRVC+ANMDD+ + V+L RI AFV QN E VP K+ CWQ+NLRLSF +RR DDI
Sbjct: 161 PGWFRVCFANMDDKTMDVALTRIVAFVHQNKETTVPMKKKCWQTNLRLSFSSRRVDDIMM 220
Query: 517 ---MMSPHSPMPQSPLVKA 470
MMSPHSP+PQSPLV+A
Sbjct: 221 AQCMMSPHSPLPQSPLVRA 239
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 576,673,645
Number of Sequences: 1393205
Number of extensions: 12038770
Number of successful extensions: 31440
Number of sequences better than 10.0: 164
Number of HSP's better than 10.0 without gapping: 28902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31262
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31401661572
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
