Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004112A_C01 KMC004112A_c01
(632 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174703.1| dihydrolipoamide S-acetyltransferase, putative;... 97 1e-19
gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [A... 97 1e-19
pir||F86468 protein F12K21.24 [imported] - Arabidopsis thaliana ... 92 4e-18
gb|AAK76609.2| putative dihydrolipoamide S-acetyltransferase [Ar... 72 6e-12
dbj|BAB01047.1| dihydrolipoamide S-acetyltransferase [Arabidopsi... 72 6e-12
>ref|NP_174703.1| dihydrolipoamide S-acetyltransferase, putative; protein id:
At1g34430.1, supported by cDNA: 101686. [Arabidopsis
thaliana] gi|12323852|gb|AAG51893.1|AC023913_1
dihydrolipoamide S-acetyltransferase, putative;
19109-21166 [Arabidopsis thaliana]
gi|22135832|gb|AAM91102.1| At1g34430/F7P12_2
[Arabidopsis thaliana] gi|24111345|gb|AAN46796.1|
At1g34430/F7P12_2 [Arabidopsis thaliana]
Length = 465
Score = 97.4 bits (241), Expect = 1e-19
Identities = 47/56 (83%), Positives = 52/56 (91%)
Frame = -2
Query: 631 GASEPSVVATQDGRIGMKNPMQVHVTADHRVIYGADLASFLPTLSQIIEDPKDVTF 464
GAS+PSVVAT+DGRIGMKN MQV+VTADHRVIYGADLA FL TL+ IIEDPKD+TF
Sbjct: 410 GASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKDLTF 465
>gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis
thaliana]
Length = 464
Score = 97.4 bits (241), Expect = 1e-19
Identities = 47/56 (83%), Positives = 52/56 (91%)
Frame = -2
Query: 631 GASEPSVVATQDGRIGMKNPMQVHVTADHRVIYGADLASFLPTLSQIIEDPKDVTF 464
GAS+PSVVAT+DGRIGMKN MQV+VTADHRVIYGADLA FL TL+ IIEDPKD+TF
Sbjct: 409 GASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKDLTF 464
>pir||F86468 protein F12K21.24 [imported] - Arabidopsis thaliana
gi|8778253|gb|AAF79262.1|AC023279_11 F12K21.24
[Arabidopsis thaliana]
Length = 467
Score = 92.4 bits (228), Expect = 4e-18
Identities = 47/58 (81%), Positives = 52/58 (89%), Gaps = 2/58 (3%)
Frame = -2
Query: 631 GASEPSVVATQDGRIGMKNPMQVHV--TADHRVIYGADLASFLPTLSQIIEDPKDVTF 464
GAS+PSVVAT+DGRIGMKN MQV+V TADHRVIYGADLA FL TL+ IIEDPKD+TF
Sbjct: 410 GASQPSVVATKDGRIGMKNQMQVNVNVTADHRVIYGADLAQFLQTLASIIEDPKDLTF 467
>gb|AAK76609.2| putative dihydrolipoamide S-acetyltransferase [Arabidopsis
thaliana]
Length = 369
Score = 72.0 bits (175), Expect = 6e-12
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -2
Query: 631 GASEPSVVATQDGRIGMKNPMQVHVTADHRVIYGADLASFLPTLSQIIEDPKDVT 467
GAS+P+VVA +DG +KN M V+VTADHR++YGADLA+FL T ++IIE+P +T
Sbjct: 314 GASKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSLT 368
>dbj|BAB01047.1| dihydrolipoamide S-acetyltransferase [Arabidopsis thaliana]
Length = 432
Score = 72.0 bits (175), Expect = 6e-12
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -2
Query: 631 GASEPSVVATQDGRIGMKNPMQVHVTADHRVIYGADLASFLPTLSQIIEDPKDVT 467
GAS+P+VVA +DG +KN M V+VTADHR++YGADLA+FL T ++IIE+P +T
Sbjct: 377 GASKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSLT 431
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,321,912
Number of Sequences: 1393205
Number of extensions: 9515274
Number of successful extensions: 22657
Number of sequences better than 10.0: 167
Number of HSP's better than 10.0 without gapping: 21867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22648
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
