Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004080A_C01 KMC004080A_c01
(598 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD70622.1| 1-aminocyclopropane-1-carboxylic acid oxidase [C... 176 2e-43
gb|AAN87846.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Po... 166 2e-40
ref|NP_565154.1| 1-aminocyclopropane-1-carboxylate oxidase, puta... 141 7e-33
gb|AAM63764.1| 1-aminocyclopropane-1-carboxylate oxidase, putati... 140 2e-32
sp|Q9FR99|ACCO_MUSAC 1-aminocyclopropane-1-carboxylate oxidase (... 137 8e-32
>emb|CAD70622.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Cicer arietinum]
Length = 308
Score = 176 bits (447), Expect = 2e-43
Identities = 85/98 (86%), Positives = 92/98 (93%)
Frame = -2
Query: 597 PNAIVINTGDQIEVLSNGRYKSCWHRVLGSPSGNRRSVASFYNPSLKATISPAPQLVVEK 418
PNAIVINTGDQIEVL+NGRYKSCWHRVL S GNRRS+ASFYNP LKATISPAPQL EK
Sbjct: 211 PNAIVINTGDQIEVLTNGRYKSCWHRVLTSTDGNRRSIASFYNPPLKATISPAPQL-AEK 269
Query: 417 ENQEVEDTYPEFVFGDYMSVYAEQKFLPKEPRFQAVRA 304
ENQ+V+DTYP+FVFGDYMSVYAEQKFLPKEPRF+AV+A
Sbjct: 270 ENQQVDDTYPKFVFGDYMSVYAEQKFLPKEPRFKAVKA 307
>gb|AAN87846.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Populus tremula x
Populus tremuloides]
Length = 310
Score = 166 bits (421), Expect = 2e-40
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = -2
Query: 594 NAIVINTGDQIEVLSNGRYKSCWHRVLGSPSGNRRSVASFYNPSLKATISPAPQLVVEKE 415
N IVINTGDQIEVLSNGRYKS WHRVL SP GNRRS+ASFYNPSLKATI+PAP L VEK+
Sbjct: 214 NTIVINTGDQIEVLSNGRYKSTWHRVLASPDGNRRSIASFYNPSLKATIAPAPGL-VEKD 272
Query: 414 NQEVEDTYPEFVFGDYMSVYAEQKFLPKEPRFQAVRA 304
+E++ TYP+F+FGDYMS+YA+QKFLPKEPRFQAVRA
Sbjct: 273 GEEIDQTYPKFLFGDYMSIYAKQKFLPKEPRFQAVRA 309
>ref|NP_565154.1| 1-aminocyclopropane-1-carboxylate oxidase, putative; protein id:
At1g77330.1, supported by cDNA: 269582. [Arabidopsis
thaliana]
Length = 307
Score = 141 bits (355), Expect = 7e-33
Identities = 71/98 (72%), Positives = 78/98 (79%)
Frame = -2
Query: 597 PNAIVINTGDQIEVLSNGRYKSCWHRVLGSPSGNRRSVASFYNPSLKATISPAPQLVVEK 418
PNAIVINTGDQIEVLSNGRYKS WHRVL GNRRS+ASFYNPS KA I PA V E+
Sbjct: 213 PNAIVINTGDQIEVLSNGRYKSAWHRVLAREEGNRRSIASFYNPSYKAAIGPA--AVAEE 270
Query: 417 ENQEVEDTYPEFVFGDYMSVYAEQKFLPKEPRFQAVRA 304
E E + YP+FVFGDYM VYA QKF+PKEPRF AV++
Sbjct: 271 EGSEKK--YPKFVFGDYMDVYANQKFMPKEPRFLAVKS 306
>gb|AAM63764.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Arabidopsis
thaliana]
Length = 307
Score = 140 bits (352), Expect = 2e-32
Identities = 70/98 (71%), Positives = 78/98 (79%)
Frame = -2
Query: 597 PNAIVINTGDQIEVLSNGRYKSCWHRVLGSPSGNRRSVASFYNPSLKATISPAPQLVVEK 418
PNAIVINTGDQIEVLSNGRYKS WHRV+ GNRRS+ASFYNPS KA I PA V E+
Sbjct: 213 PNAIVINTGDQIEVLSNGRYKSAWHRVVAREEGNRRSIASFYNPSYKAAIGPA--TVAEE 270
Query: 417 ENQEVEDTYPEFVFGDYMSVYAEQKFLPKEPRFQAVRA 304
E E + YP+FVFGDYM VYA QKF+PKEPRF AV++
Sbjct: 271 EGSEKK--YPKFVFGDYMDVYANQKFMPKEPRFLAVKS 306
>sp|Q9FR99|ACCO_MUSAC 1-aminocyclopropane-1-carboxylate oxidase (ACC oxidase)
(Ethylene-forming enzyme) (EFE)
gi|12001826|gb|AAG43056.1|AF030410_1
1-aminocyclopropane-1-carboxylate oxidase; ACC oxidase
[Musa acuminata]
Length = 306
Score = 137 bits (346), Expect = 8e-32
Identities = 68/97 (70%), Positives = 78/97 (80%)
Frame = -2
Query: 594 NAIVINTGDQIEVLSNGRYKSCWHRVLGSPSGNRRSVASFYNPSLKATISPAPQLVVEKE 415
+AIVINTGDQIEVLSNGRYKS WHRVL + GNRRS+ASFYNPSLKATI+PA E+
Sbjct: 211 DAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEA 270
Query: 414 NQEVEDTYPEFVFGDYMSVYAEQKFLPKEPRFQAVRA 304
YP+F+FGDYM VYA+QK+ PKEPRF+AVRA
Sbjct: 271 APPA--LYPKFLFGDYMDVYAKQKYEPKEPRFEAVRA 305
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 572,560,886
Number of Sequences: 1393205
Number of extensions: 13699193
Number of successful extensions: 40183
Number of sequences better than 10.0: 579
Number of HSP's better than 10.0 without gapping: 38217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40031
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
