Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004063A_C01 KMC004063A_c01
(844 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181896.2| putative SF16 protein {Helianthus annuus}; prot... 140 2e-32
ref|NP_191528.1| putative protein; protein id: At3g59690.1 [Arab... 119 4e-26
pir||B84869 probable SF16 protein (Helianthus annuus) [imported]... 113 4e-24
dbj|BAC06266.1| contains EST D39962(S1657)~similar to Arabidopsi... 58 2e-07
ref|NP_048405.1| contains Pro-rich Px motifs: SPKPP (20X), PEPPA... 55 2e-06
>ref|NP_181896.2| putative SF16 protein {Helianthus annuus}; protein id: At2g43680.1,
supported by cDNA: gi_20466711 [Arabidopsis thaliana]
gi|20466712|gb|AAM20673.1| putative SF16 protein
[Arabidopsis thaliana]
Length = 668
Score = 140 bits (353), Expect = 2e-32
Identities = 76/126 (60%), Positives = 85/126 (67%), Gaps = 4/126 (3%)
Frame = +3
Query: 471 MGKKGSWFAAIKRVFTHHSK---GTDSDSTNSKEKKK-GVGKQRHGETNSFIPIFREPSS 638
M KKGSWF+AIKRVFT HSK + + + KEKKK G GK RHGETNSF+PIFREPSS
Sbjct: 1 MVKKGSWFSAIKRVFTPHSKEKLANEPERKSGKEKKKKGFGKLRHGETNSFLPIFREPSS 60
Query: 639 IEKIFGDFEREQQQILTIRPPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSP 818
IEKI G+ ER+ L RPPTP A PPR ASPR SP+ SPR ASPR PSP
Sbjct: 61 IEKILGEAERDHN--LVFRPPTPDRPNPYSASPPPRPASPRVASPRPTSPRVASPRVPSP 118
Query: 819 RVTSPK 836
R P+
Sbjct: 119 RAEVPR 124
Score = 47.0 bits (110), Expect = 4e-04
Identities = 23/48 (47%), Positives = 30/48 (61%)
Frame = +3
Query: 693 RPPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
RP TP +P +P PR +PR +PK PSPR+ PR +PR T+PK
Sbjct: 248 RPTTP--RPPSPLADAPRLDAPRPTTPKPPSPRSDPPRLDAPRPTTPK 293
Score = 46.6 bits (109), Expect = 5e-04
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Frame = +3
Query: 687 TIRPPTP--PEQPKTPALVP------PRAASPRAPSPKAPSPRAASPRSPSPRVTSPKAA 842
T+RP + P Q TP VP PR ASP+A S K PSPRA P +PR SP+AA
Sbjct: 176 TLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRAEPPTLDTPRPPSPRAA 235
Score = 43.5 bits (101), Expect = 0.004
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +3
Query: 687 TIRPPTPPEQPKTPALVPPRAASPRAPSPKA-----PSPRAASPRSPSPRVTSPKA 839
T RPP+P P L PR +P+ PSP++ +PR +P+ PSPR SP+A
Sbjct: 251 TPRPPSPLAD--APRLDAPRPTTPKPPSPRSDPPRLDAPRPTTPKPPSPRSVSPRA 304
Score = 43.5 bits (101), Expect = 0.004
Identities = 22/56 (39%), Positives = 32/56 (56%), Gaps = 3/56 (5%)
Frame = +3
Query: 678 QILTIRPPTPPEQPKT---PALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
Q ++ +PP+P +P T P PRAAS RA P+ + R +PR PSP +P+
Sbjct: 208 QAISSKPPSPRAEPPTLDTPRPPSPRAASLRADPPRLDAARPTTPRPPSPLADAPR 263
Score = 43.1 bits (100), Expect = 0.005
Identities = 21/43 (48%), Positives = 27/43 (61%)
Frame = +3
Query: 693 RPPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPR 821
RP TP +P +P PPR +PR +PK PSPR+ SPR+ R
Sbjct: 268 RPTTP--KPPSPRSDPPRLDAPRPTTPKPPSPRSVSPRAVQRR 308
Score = 40.0 bits (92), Expect = 0.043
Identities = 19/47 (40%), Positives = 26/47 (54%)
Frame = +3
Query: 696 PPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
P +P +P PP +PR PSP+A S RA PR + R T+P+
Sbjct: 207 PQAISSKPPSPRAEPPTLDTPRPPSPRAASLRADPPRLDAARPTTPR 253
Score = 38.9 bits (89), Expect = 0.096
Identities = 21/63 (33%), Positives = 31/63 (48%), Gaps = 13/63 (20%)
Frame = +3
Query: 687 TIRPPTP-------------PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVT 827
T RPP+P +P TP P A +PR +P+ +P+ SPRS PR+
Sbjct: 226 TPRPPSPRAASLRADPPRLDAARPTTPRPPSPLADAPRLDAPRPTTPKPPSPRSDPPRLD 285
Query: 828 SPK 836
+P+
Sbjct: 286 APR 288
Score = 34.7 bits (78), Expect = 1.8
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 705 PPEQPKTPALVPPRAASPRA-PSPKAPSPRAASPRSPSPRVTSPKA 839
PP VP + +P + PSP+ SPR ASP++ S + SP+A
Sbjct: 174 PPTLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRA 219
>ref|NP_191528.1| putative protein; protein id: At3g59690.1 [Arabidopsis thaliana]
gi|11292163|pir||T49310 hypothetical protein T16L24.240
- Arabidopsis thaliana gi|6996305|emb|CAB75466.1|
putative protein [Arabidopsis thaliana]
gi|22135900|gb|AAM91532.1| putative protein [Arabidopsis
thaliana] gi|24899697|gb|AAN65063.1| putative protein
[Arabidopsis thaliana]
Length = 517
Score = 119 bits (299), Expect = 4e-26
Identities = 71/152 (46%), Positives = 87/152 (56%), Gaps = 30/152 (19%)
Frame = +3
Query: 471 MGKKGSWFAAIKRVFTHHSKGT---------DSDSTNSKEKKKGVGKQ-RHGETNSFIPI 620
MGKKGSWF+AIKRVFT HSK + S N ++KKKG GK+ R+GETNSF+PI
Sbjct: 1 MGKKGSWFSAIKRVFTPHSKEKQLSNNNQEPEIKSENKEKKKKGFGKKLRNGETNSFLPI 60
Query: 621 FREPSSIEKIFGDFEREQQQILTIRPPTP-----------------PEQPKTPA---LVP 740
FR+PSSIEKI + ERE L RPPTP P PK P+ +
Sbjct: 61 FRQPSSIEKILSEAEREHN--LVFRPPTPTDRANSSSTSVASPLVRPASPKVPSQRYVSS 118
Query: 741 PRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
P+ SPR P+ P+ SP+ PSPR SP+
Sbjct: 119 PKPISPRVAYPQVHYPKPPSPKPPSPRAVSPR 150
>pir||B84869 probable SF16 protein (Helianthus annuus) [imported] - Arabidopsis
thaliana gi|2281102|gb|AAB64038.1| putative SF16 protein
{Helianthus annuus} [Arabidopsis thaliana]
Length = 657
Score = 113 bits (282), Expect = 4e-24
Identities = 57/96 (59%), Positives = 65/96 (67%)
Frame = +3
Query: 549 TNSKEKKKGVGKQRHGETNSFIPIFREPSSIEKIFGDFEREQQQILTIRPPTPPEQPKTP 728
+ ++KKKG GK RHGETNSF+PIFREPSSIEKI G+ ER+ L RPPTP
Sbjct: 20 SGKEKKKKGFGKLRHGETNSFLPIFREPSSIEKILGEAERDHN--LVFRPPTPDRPNPYS 77
Query: 729 ALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
A PPR ASPR SP+ SPR ASPR PSPR P+
Sbjct: 78 ASPPPRPASPRVASPRPTSPRVASPRVPSPRAEVPR 113
Score = 47.0 bits (110), Expect = 4e-04
Identities = 23/48 (47%), Positives = 30/48 (61%)
Frame = +3
Query: 693 RPPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
RP TP +P +P PR +PR +PK PSPR+ PR +PR T+PK
Sbjct: 237 RPTTP--RPPSPLADAPRLDAPRPTTPKPPSPRSDPPRLDAPRPTTPK 282
Score = 46.6 bits (109), Expect = 5e-04
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Frame = +3
Query: 687 TIRPPTP--PEQPKTPALVP------PRAASPRAPSPKAPSPRAASPRSPSPRVTSPKAA 842
T+RP + P Q TP VP PR ASP+A S K PSPRA P +PR SP+AA
Sbjct: 165 TLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRAEPPTLDTPRPPSPRAA 224
Score = 43.5 bits (101), Expect = 0.004
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +3
Query: 687 TIRPPTPPEQPKTPALVPPRAASPRAPSPKA-----PSPRAASPRSPSPRVTSPKA 839
T RPP+P P L PR +P+ PSP++ +PR +P+ PSPR SP+A
Sbjct: 240 TPRPPSPLAD--APRLDAPRPTTPKPPSPRSDPPRLDAPRPTTPKPPSPRSVSPRA 293
Score = 43.5 bits (101), Expect = 0.004
Identities = 22/56 (39%), Positives = 32/56 (56%), Gaps = 3/56 (5%)
Frame = +3
Query: 678 QILTIRPPTPPEQPKT---PALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
Q ++ +PP+P +P T P PRAAS RA P+ + R +PR PSP +P+
Sbjct: 197 QAISSKPPSPRAEPPTLDTPRPPSPRAASLRADPPRLDAARPTTPRPPSPLADAPR 252
Score = 43.1 bits (100), Expect = 0.005
Identities = 21/43 (48%), Positives = 27/43 (61%)
Frame = +3
Query: 693 RPPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPR 821
RP TP +P +P PPR +PR +PK PSPR+ SPR+ R
Sbjct: 257 RPTTP--KPPSPRSDPPRLDAPRPTTPKPPSPRSVSPRAVQRR 297
Score = 40.0 bits (92), Expect = 0.043
Identities = 19/47 (40%), Positives = 26/47 (54%)
Frame = +3
Query: 696 PPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
P +P +P PP +PR PSP+A S RA PR + R T+P+
Sbjct: 196 PQAISSKPPSPRAEPPTLDTPRPPSPRAASLRADPPRLDAARPTTPR 242
Score = 38.9 bits (89), Expect = 0.096
Identities = 21/63 (33%), Positives = 31/63 (48%), Gaps = 13/63 (20%)
Frame = +3
Query: 687 TIRPPTP-------------PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVT 827
T RPP+P +P TP P A +PR +P+ +P+ SPRS PR+
Sbjct: 215 TPRPPSPRAASLRADPPRLDAARPTTPRPPSPLADAPRLDAPRPTTPKPPSPRSDPPRLD 274
Query: 828 SPK 836
+P+
Sbjct: 275 APR 277
Score = 34.7 bits (78), Expect = 1.8
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 705 PPEQPKTPALVPPRAASPRA-PSPKAPSPRAASPRSPSPRVTSPKA 839
PP VP + +P + PSP+ SPR ASP++ S + SP+A
Sbjct: 163 PPTLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRA 208
>dbj|BAC06266.1| contains EST D39962(S1657)~similar to Arabidopsis thaliana
chromosome 3, At3g59690~unknown protein [Oryza sativa
(japonica cultivar-group)] gi|22093585|dbj|BAC06881.1|
P0674H09.3 [Oryza sativa (japonica cultivar-group)]
Length = 563
Score = 57.8 bits (138), Expect = 2e-07
Identities = 51/150 (34%), Positives = 63/150 (42%), Gaps = 26/150 (17%)
Frame = +3
Query: 471 MGKKGSWFAAIKRVFT------------------HHSKGTDSDSTNSKEKKKGVGKQR-H 593
MGKKG W A+K+ FT H G + +K+ G G+ R H
Sbjct: 1 MGKKGGWITALKKAFTSGPKDKPTNGQLVAQYSHQHRSGGGGAAAARDKKRWGFGRSRQH 60
Query: 594 GETNSF-----IPIFREPSSIEKIFGDFEREQQQILTIRPPTPPEQ--PKTPALVPPRAA 752
E + IP++REPSSIEKI D E EQQ R Q P PA V AA
Sbjct: 61 AEPSPAGALINIPLYREPSSIEKILVDAEMEQQH----RQYRAHYQITPAKPATVTAPAA 116
Query: 753 SPRAPSPKAPSPRAASPRSPSPRVTSPKAA 842
+ P+P P P +A R V K A
Sbjct: 117 AASLPAP--PPPVSARERQRRRDVDDDKPA 144
>ref|NP_048405.1| contains Pro-rich Px motifs: SPKPP (20X), PEPPA (9X); similar to
soybean pro-rich cell wall protein, corresponds to
Swiss-Prot Accession Number P13993 [Paramecium bursaria
Chlorella virus 1] gi|7461884|pir||T17547 proline-rich
protein A57R - Chlorella virus PBCV-1
gi|624076|gb|AAC96425.1| contains Pro-rich Px motifs:
SPKPP (20X), PEPPA (9X); similar to soybean pro-rich
cell wall protein, corresponds to Swiss-Prot Accession
Number P13993 [Paramecium bursaria Chlorella virus 1]
Length = 544
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 44 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 94
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 39 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 89
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 69 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 119
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 64 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 114
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 59 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 109
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 84 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 134
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 79 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 129
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 49 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 99
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 54 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 104
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (65%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 74 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 124
Score = 52.0 bits (123), Expect = 1e-05
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ PSP+ +P+
Sbjct: 89 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPAPE 139
Score = 50.1 bits (118), Expect = 4e-05
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ SP+ P+P +P+
Sbjct: 94 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPAPEPPAPE 144
Score = 48.5 bits (114), Expect = 1e-04
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +3
Query: 678 QILTIRPPTPPEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
QI+T + T PK P+ PP SP+ PSPK PSP+ SP+ PSP+ SPK
Sbjct: 26 QIVTTQT-TVVNSPKPPSPKPP---SPKPPSPKPPSPKPPSPKPPSPKPPSPK 74
Score = 48.1 bits (113), Expect = 2e-04
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK PSP+ +P P+P +P+
Sbjct: 99 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPAPEPPAPEPPAPE 149
Score = 46.2 bits (108), Expect = 6e-04
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPKA 839
+PP+P P PK PA PP A P AP P AP P A P +P P P A
Sbjct: 124 KPPSPKPPSPKPPAPEPP-APEPPAPEPPAPEPPAPEPPAPEPPALEPPA 172
Score = 46.2 bits (108), Expect = 6e-04
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ PSPK P+P +P P+P +P+
Sbjct: 104 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPAPEPPAPEPPAPEPPAPE 154
Score = 45.1 bits (105), Expect = 0.001
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPKA 839
+PP+P P PK P+ PP A P AP P AP P A P +P P P A
Sbjct: 119 KPPSPKPPSPKPPSPKPP-APEPPAPEPPAPEPPAPEPPAPEPPAPEPPA 167
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/56 (42%), Positives = 31/56 (54%), Gaps = 3/56 (5%)
Frame = +3
Query: 678 QILTIRPPTPPEQPKTPALVPPRAASPRAPSP---KAPSPRAASPRSPSPRVTSPK 836
Q + P PP PK P+ PP + P +P P K PSP+ SP+ PSP+ SPK
Sbjct: 31 QTTVVNSPKPPS-PKPPSPKPP-SPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 84
Score = 43.9 bits (102), Expect = 0.003
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPKA 839
+PP P P P+ PA PP A P AP P AP P A P +P P P A
Sbjct: 134 KPPAPEPPAPEPPAPEPP-APEPPAPEPPAPEPPALEPPAPEPPAPEPPA 182
Score = 43.9 bits (102), Expect = 0.003
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPKA 839
+PP+P P PK P+ PP + P AP P AP P A P +P P P A
Sbjct: 114 KPPSPKPPSPKPPSPKPP-SPKPPAPEPPAPEPPAPEPPAPEPPAPEPPA 162
Score = 43.5 bits (101), Expect = 0.004
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 693 RPPTP-PEQPKTPALVPP--RAASPRAPSPKAPSPRAASPRSPSPRVTSPK 836
+PP+P P PK P+ PP + SP+ P+P+ P+P +P P+P +P+
Sbjct: 109 KPPSPKPPSPKPPSPKPPSPKPPSPKPPAPEPPAPEPPAPEPPAPEPPAPE 159
Score = 39.3 bits (90), Expect = 0.073
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 696 PPTP-PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPKA 839
PP P P P+ PA PP A P AP P A P A P +P P P A
Sbjct: 140 PPAPEPPAPEPPAPEPP-APEPPAPEPPALEPPAPEPPAPEPPAPEPPA 187
Score = 37.7 bits (86), Expect = 0.21
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 696 PPTP-PEQPKTPALVPPRAASPRAPSPKAPSPRAASPRSP 812
PP P P P+ PA PP A P AP P AP P A P +P
Sbjct: 150 PPAPEPPAPEPPAPEPP-ALEPPAPEPPAPEPPAPEPPAP 188
Score = 33.1 bits (74), Expect = 5.3
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 699 PTPPEQPKTPALVPPRAASPRAPSP---KAPSPRAASPRSPSPRVTSPK 836
P Q T + P +P P K PSP+ SP+ PSP+ SPK
Sbjct: 21 PFTTNQIVTTQTTVVNSPKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 69
Score = 32.7 bits (73), Expect = 6.9
Identities = 17/46 (36%), Positives = 24/46 (51%), Gaps = 3/46 (6%)
Frame = +3
Query: 708 PEQPKTPALVPPRAASPRAPSPKA---PSPRAASPRSPSPRVTSPK 836
PE T +V + +P P + PSP+ SP+ PSP+ SPK
Sbjct: 19 PEPFTTNQIVTTQTTVVNSPKPPSPKPPSPKPPSPKPPSPKPPSPK 64
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 807,960,267
Number of Sequences: 1393205
Number of extensions: 20184895
Number of successful extensions: 185546
Number of sequences better than 10.0: 2039
Number of HSP's better than 10.0 without gapping: 93423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156168
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 44037481446
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
