Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004049A_C01 KMC004049A_c01
(716 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO23072.1| R 14 protein [Glycine max] 136 3e-31
emb|CAA08798.1| NL27 [Solanum tuberosum] 131 1e-29
gb|AAG09951.1| resistance protein LM6 [Glycine max] 131 1e-29
gb|AAO23077.1| R 8 protein [Glycine max] 131 1e-29
gb|AAO23073.1| R 13 protein [Glycine max] 130 1e-29
>gb|AAO23072.1| R 14 protein [Glycine max]
Length = 641
Score = 136 bits (342), Expect = 3e-31
Identities = 70/147 (47%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Frame = -1
Query: 713 FTGFLYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDE 534
FTG LY AL +G TF D+E L GG+EI +L A ++SR++I V S+NY +SS+CLDE
Sbjct: 27 FTGNLYRALCEKGIHTFFDEEKLHGGDEITPALSKAIQESRIAITVLSQNYAFSSFCLDE 86
Query: 533 LVKIVECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALS 354
LV I+ C +++ LV P+FY V+ SD+ Q+ SY AMI H+K + ++++KWR AL
Sbjct: 87 LVTILHC-KSEGLLVIPVFYNVDPSDLRHQKGSYGEAMIKHQKRFESKMEKLQKWRMALK 145
Query: 353 AMAKLEGHNVKE-NKYEYEFIKKIVEK 276
+A L GH+ K+ + YEY+FI IVE+
Sbjct: 146 QVADLSGHHFKDGDAYEYKFIGSIVEE 172
>emb|CAA08798.1| NL27 [Solanum tuberosum]
Length = 821
Score = 131 bits (329), Expect = 1e-29
Identities = 67/149 (44%), Positives = 97/149 (64%), Gaps = 3/149 (2%)
Frame = -1
Query: 716 SFTGFLYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLD 537
+FT LY L+ G TF DD+ L G+ I + LL A E+S++++I+FS+NY S WCL+
Sbjct: 34 TFTSHLYEGLKNRGIFTFQDDKRLENGDSIPEELLKAIEESQVALIIFSKNYATSRWCLN 93
Query: 536 ELVKIVECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSD---EVKKWR 366
ELVKI+EC E K Q+V PIFY V+ S+V Q S+ A HE Y D + +VK WR
Sbjct: 94 ELVKIMECKEEKGQIVIPIFYDVDPSEVRKQTKSFAEAFTEHESKYANDIEGMQKVKGWR 153
Query: 365 SALSAMAKLEGHNVKENKYEYEFIKKIVE 279
+ALS A L+G+++ N+ E ++I+ IV+
Sbjct: 154 TALSDAADLKGYDI-SNRIESDYIQHIVD 181
>gb|AAG09951.1| resistance protein LM6 [Glycine max]
Length = 863
Score = 131 bits (329), Expect = 1e-29
Identities = 69/147 (46%), Positives = 101/147 (67%), Gaps = 1/147 (0%)
Frame = -1
Query: 713 FTGFLYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDE 534
FTG+LY AL G TF+DD+ L G+EI +L +A ++SR++I V S+NY SS+CLDE
Sbjct: 10 FTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIAITVLSQNYASSSFCLDE 69
Query: 533 LVKIVECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALS 354
LV I+ C +++ LV P+FYKV+ S V Q+ SY AM H+K + + ++++KWR AL
Sbjct: 70 LVTILHC-KSQGLLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRFKANKEKLQKWRMALH 128
Query: 353 AMAKLEGHNVKE-NKYEYEFIKKIVEK 276
+A L G++ K+ + YEYEFI IVE+
Sbjct: 129 QVADLSGYHFKDGDSYEYEFIGSIVEE 155
>gb|AAO23077.1| R 8 protein [Glycine max]
Length = 892
Score = 131 bits (329), Expect = 1e-29
Identities = 69/147 (46%), Positives = 101/147 (67%), Gaps = 1/147 (0%)
Frame = -1
Query: 713 FTGFLYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDE 534
FTG+LY AL G TF+DD+ L G+EI +L +A ++SR++I V S+NY SS+CLDE
Sbjct: 27 FTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIAITVLSQNYASSSFCLDE 86
Query: 533 LVKIVECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALS 354
LV I+ C +++ LV P+FYKV+ S V Q+ SY AM H+K + + ++++KWR AL
Sbjct: 87 LVTILHC-KSQGLLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRFKANKEKLQKWRMALH 145
Query: 353 AMAKLEGHNVKE-NKYEYEFIKKIVEK 276
+A L G++ K+ + YEYEFI IVE+
Sbjct: 146 QVADLSGYHFKDGDSYEYEFIGSIVEE 172
>gb|AAO23073.1| R 13 protein [Glycine max]
Length = 641
Score = 130 bits (328), Expect = 1e-29
Identities = 69/154 (44%), Positives = 101/154 (64%), Gaps = 1/154 (0%)
Frame = -1
Query: 713 FTGFLYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDE 534
FTG LY AL G TF+DD+ L G++I +L +A +SR++I V SENY +SS+CLDE
Sbjct: 27 FTGNLYKALGDRGIYTFIDDQELPRGDKITPALSNAINESRIAITVLSENYAFSSFCLDE 86
Query: 533 LVKIVECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALS 354
LV I+ C +++ LV P+FYKV+ SDV Q+ SY M H+K + +++++WR AL
Sbjct: 87 LVTILHC-KSEGLLVIPVFYKVDPSDVRHQKGSYGETMTKHQKRFESKMEKLREWRMALQ 145
Query: 353 AMAKLEGHNVKE-NKYEYEFIKKIVEKAIAIENH 255
+A L G++ K+ + YEY+FI IVE+ NH
Sbjct: 146 QVADLSGYHFKDGDSYEYKFIGNIVEEVSRKINH 179
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 605,055,649
Number of Sequences: 1393205
Number of extensions: 12999702
Number of successful extensions: 35653
Number of sequences better than 10.0: 386
Number of HSP's better than 10.0 without gapping: 33787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35433
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33217548346
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
