Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003975A_C01 KMC003975A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563844.1| putative glucose-6-phosphate dehydrogenase; pro... 91 1e-17
pir||E86227 hypothetical protein [imported] - Arabidopsis thalia... 91 1e-17
pir||T09089 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (c... 71 9e-12
emb|CAB52685.1| plastidic glucose-6-phosphate dehydrogenase [Dun... 70 2e-11
sp|O24357|G6PC_SPIOL Glucose-6-phosphate 1-dehydrogenase, chloro... 69 3e-11
>ref|NP_563844.1| putative glucose-6-phosphate dehydrogenase; protein id:
At1g09420.1, supported by cDNA: gi_15810386 [Arabidopsis
thaliana] gi|25452977|sp|Q93ZW0|GPD4_ARATH
Glucose-6-phosphate 1-dehydrogenase 4, chloroplast
precursor (G6PD4) (G6PDH4) gi|15810387|gb|AAL07081.1|
putative glucose-6-phosphate dehydrogenase [Arabidopsis
thaliana] gi|21436353|gb|AAM51346.1| putative
glucose-6-phosphate dehydrogenase [Arabidopsis thaliana]
Length = 625
Score = 90.5 bits (223), Expect = 1e-17
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = -2
Query: 533 RSDELAAAWNILTPILNEIDKDNVSVELYELGGRGPVGAYYLWAKHGIRWVED 375
RSDE+AAAWNIL+P+L EIDK + + ELYE GGRGPV AYYLWAKHG+ W +D
Sbjct: 573 RSDEVAAAWNILSPVLEEIDKHHTAPELYEFGGRGPVAAYYLWAKHGVPWADD 625
>pir||E86227 hypothetical protein [imported] - Arabidopsis thaliana
gi|3482917|gb|AAC33202.1| Similar to Glucose-6-phosphate
dehydrogenases, gi|2276344, gi|2829880, gi|2352919 and
others. [Arabidopsis thaliana]
Length = 632
Score = 90.5 bits (223), Expect = 1e-17
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = -2
Query: 533 RSDELAAAWNILTPILNEIDKDNVSVELYELGGRGPVGAYYLWAKHGIRWVED 375
RSDE+AAAWNIL+P+L EIDK + + ELYE GGRGPV AYYLWAKHG+ W +D
Sbjct: 580 RSDEVAAAWNILSPVLEEIDKHHTAPELYEFGGRGPVAAYYLWAKHGVPWADD 632
>pir||T09089 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (clone O30A5) -
spinach plasmid pZL1 (fragment)
gi|2276346|emb|CAA03940.1| Glucose-6-phosphate
dehydrogenase [Spinacia oleracea]
Length = 317
Score = 70.9 bits (172), Expect = 9e-12
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -2
Query: 533 RSDELAAAWNILTPILNEIDKDNVSVELYELGGRGPVGAYYLWAKHGIRW 384
RSDEL AAW++ TP+L E+++ V+ ELY G RGPVGA+YL AKH +RW
Sbjct: 260 RSDELDAAWSLFTPLLKELEEKKVAPELYPYGSRGPVGAHYLAAKHNVRW 309
>emb|CAB52685.1| plastidic glucose-6-phosphate dehydrogenase [Dunaliella bioculata]
Length = 590
Score = 69.7 bits (169), Expect = 2e-11
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = -2
Query: 533 RSDELAAAWNILTPILNEIDKDNVSVELYELGGRGPVGAYYLWAKHGIRW 384
R DEL AWNI TP+L+EI++ V+ ELY G RGPVGA+YL AK+ +RW
Sbjct: 533 RDDELEQAWNIFTPVLHEIERRKVAPELYPYGSRGPVGAHYLAAKYNVRW 582
>sp|O24357|G6PC_SPIOL Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (G6PD)
gi|7431278|pir||T09088 glucose-6-phosphate
1-dehydrogenase (EC 1.1.1.49) - spinach
gi|2276344|emb|CAA03939.1| Glucose-6-phosphate
dehydrogenase [Spinacia oleracea]
Length = 574
Score = 69.3 bits (168), Expect = 3e-11
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = -2
Query: 533 RSDELAAAWNILTPILNEIDKDNVSVELYELGGRGPVGAYYLWAKHGIRW 384
RSD+L AAW++ TP+L E+++ V+ ELY G RGPVGA+YL AKH +RW
Sbjct: 517 RSDKLDAAWSLFTPLLKELEEKKVAPELYPYGSRGPVGAHYLAAKHNVRW 566
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,124,757
Number of Sequences: 1393205
Number of extensions: 8927485
Number of successful extensions: 25759
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 24198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25622
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
