Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003974A_C01 KMC003974A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T12184 probable transcription factor - fava bean gi|2104683... 89 2e-17
ref|NP_198973.1| transcription factor-like protein; protein id: ... 41 0.010
ref|NP_034251.1| eukaryotic translation initiation factor 2 alph... 32 3.6
ref|NP_004827.2| eukaryotic translation initiation factor 2-alph... 32 3.6
sp|Q9NZJ5|E2K3_HUMAN Eukaryotic translation initiation factor 2-... 32 3.6
>pir||T12184 probable transcription factor - fava bean
gi|2104683|emb|CAA66482.1| transcription factor [Vicia
faba]
Length = 828
Score = 89.4 bits (220), Expect = 2e-17
Identities = 48/86 (55%), Positives = 59/86 (67%)
Frame = -2
Query: 526 GGTVLSVSRTDDLFTSQPDQNWRPTRRMRGSLELDSRHYPEAVTQRIIAPTQTPVLGSRP 347
G V +VSRTD+LF SQPDQNWRPT RMRGS L + + V QR+I P+ SRP
Sbjct: 741 GPPVQAVSRTDELFNSQPDQNWRPTSRMRGS--LSGQQLTDDVRQRLIMPSSQEAQNSRP 798
Query: 346 QGSQPVRPTGGSPQLDVLIANNKNAH 269
QG QP +P + QL+VLIAN++NAH
Sbjct: 799 QGPQP-QPGRTTSQLNVLIANSRNAH 823
>ref|NP_198973.1| transcription factor-like protein; protein id: At5g41580.1
[Arabidopsis thaliana] gi|10178012|dbj|BAB11464.1|
transcription factor-like protein [Arabidopsis thaliana]
Length = 719
Score = 40.8 bits (94), Expect = 0.010
Identities = 31/71 (43%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -2
Query: 526 GGTVLSVSRTDDL----FTSQPDQNWRPTRRMRGSLELDSRHYPEAVTQRIIAPTQTPVL 359
G TV SVSR DL T NWRP RMRGSL S + A+ II P+Q
Sbjct: 608 GPTVQSVSRLSDLVDVDLTVPDTSNWRP--RMRGSLVPGS--HSTALDHMIIRPSQQSQT 663
Query: 358 GSRPQGSQPVR 326
+R SQPV+
Sbjct: 664 STRLNSSQPVQ 674
>ref|NP_034251.1| eukaryotic translation initiation factor 2 alpha kinase 3 [Mus
musculus] gi|17375694|sp|Q9Z2B5|E2K3_MOUSE Eukaryotic
translation initiation factor 2-alpha kinase 3 precursor
(PRKR-like endoplasmic reticulum kinase) (Pancreatic
eIF2-alpha kinase) gi|7513816|pir||T14351
serine/threonine-specific protein kinase (EC 2.7.1.-)
PERK, ER-resident - mouse gi|4107513|gb|AAD03337.1|
type-I transmembrane ER-resident serine/threonine kinase
PERK [Mus musculus]
Length = 1114
Score = 32.3 bits (72), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 398 NSLWIVPTIKFKTSTHSPCRTPILI 472
N++ +PTIK+K HSP RTP+L+
Sbjct: 417 NAIIPLPTIKWKPLIHSPSRTPVLV 441
>ref|NP_004827.2| eukaryotic translation initiation factor 2-alpha kinase 3;
eukaryotic translation initiation factor 2 alpha kinase
3 [Homo sapiens] gi|7341091|gb|AAF61199.1| eukaryotic
translation initiation factor 2 alpha kinase PEK [Homo
sapiens]
Length = 1115
Score = 32.3 bits (72), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 398 NSLWIVPTIKFKTSTHSPCRTPILI 472
N++ +PTIK+K HSP RTP+L+
Sbjct: 420 NAIIPLPTIKWKPLIHSPSRTPVLV 444
>sp|Q9NZJ5|E2K3_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 3 precursor
(PRKR-like endoplasmic reticulum kinase) (Pancreatic
eIF2-alpha kinase) (HsPEK) gi|4406380|gb|AAD19961.1|
eukaryotic translation initiation factor 2 alpha kinase
PEK [Homo sapiens] gi|9652337|gb|AAF91480.1| initiation
factor 2-alpha kinase 3 [Homo sapiens]
Length = 1115
Score = 32.3 bits (72), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 398 NSLWIVPTIKFKTSTHSPCRTPILI 472
N++ +PTIK+K HSP RTP+L+
Sbjct: 420 NAIIPLPTIKWKPLIHSPSRTPVLV 444
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 436,608,947
Number of Sequences: 1393205
Number of extensions: 8728582
Number of successful extensions: 19940
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19929
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
