Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003969A_C01 KMC003969A_c01
(491 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF87014.1|AC005292_23 F26F24.17 [Arabidopsis thaliana] 172 2e-42
ref|NP_173746.1| putative alliinase; protein id: At1g23320.1 [Ar... 172 2e-42
ref|NP_567706.1| putative alliin lyase; protein id: At4g24670.1,... 166 1e-40
ref|NP_177213.1| putative alliinase; protein id: At1g70560.1 [Ar... 164 6e-40
pir||T05567 alliin lyase homolog F22K18.130 - Arabidopsis thalia... 162 2e-39
>gb|AAF87014.1|AC005292_23 F26F24.17 [Arabidopsis thaliana]
Length = 387
Score = 172 bits (436), Expect = 2e-42
Identities = 79/148 (53%), Positives = 106/148 (71%)
Frame = +2
Query: 47 SDSTINLEKGDPLVFGKYWKKKSDECSVVIQGWEFLSYLSDTSNVCWYMLPELKGAIQRL 226
SD INL++GDP F +YW KK D C+VVI W+ +SY SDT NVCW++ PEL+ AI+ L
Sbjct: 21 SDDIINLDQGDPTAFQEYWMKKKDRCTVVIPAWDLMSYFSDTKNVCWFLEPELEKAIKAL 80
Query: 227 HHVVGNAVTQDKYIVIGTGSTQLFMAALFALSPSQTPDHPINVVSAAPHYSEYKPEIDVL 406
H +GNA T+++YIV+GTGS+QL AALFALS S + P+++V+A P+YS Y E L
Sbjct: 81 HGAIGNAATEERYIVVGTGSSQLCQAALFALS-SLSEVKPVSIVAAVPYYSTYVEEASYL 139
Query: 407 RSAVVQWAGDAGVYDKNEPYIEVVNYPN 490
+S + +W GDA +DK PYIE+V PN
Sbjct: 140 QSTLYKWEGDARTFDKKGPYIELVTSPN 167
>ref|NP_173746.1| putative alliinase; protein id: At1g23320.1 [Arabidopsis thaliana]
Length = 388
Score = 172 bits (436), Expect = 2e-42
Identities = 79/148 (53%), Positives = 106/148 (71%)
Frame = +2
Query: 47 SDSTINLEKGDPLVFGKYWKKKSDECSVVIQGWEFLSYLSDTSNVCWYMLPELKGAIQRL 226
SD INL++GDP F +YW KK D C+VVI W+ +SY SDT NVCW++ PEL+ AI+ L
Sbjct: 22 SDDIINLDQGDPTAFQEYWMKKKDRCTVVIPAWDLMSYFSDTKNVCWFLEPELEKAIKAL 81
Query: 227 HHVVGNAVTQDKYIVIGTGSTQLFMAALFALSPSQTPDHPINVVSAAPHYSEYKPEIDVL 406
H +GNA T+++YIV+GTGS+QL AALFALS S + P+++V+A P+YS Y E L
Sbjct: 82 HGAIGNAATEERYIVVGTGSSQLCQAALFALS-SLSEVKPVSIVAAVPYYSTYVEEASYL 140
Query: 407 RSAVVQWAGDAGVYDKNEPYIEVVNYPN 490
+S + +W GDA +DK PYIE+V PN
Sbjct: 141 QSTLYKWEGDARTFDKKGPYIELVTSPN 168
>ref|NP_567706.1| putative alliin lyase; protein id: At4g24670.1, supported by cDNA:
gi_15292690, supported by cDNA: gi_20259316 [Arabidopsis
thaliana] gi|15292691|gb|AAK92714.1| putative alliin
lyase [Arabidopsis thaliana] gi|20259317|gb|AAM14394.1|
putative alliin lyase [Arabidopsis thaliana]
Length = 440
Score = 166 bits (420), Expect = 1e-40
Identities = 79/147 (53%), Positives = 105/147 (70%)
Frame = +2
Query: 50 DSTINLEKGDPLVFGKYWKKKSDECSVVIQGWEFLSYLSDTSNVCWYMLPELKGAIQRLH 229
D INL+ GDP V+ +YW++ + ++VI GW+ LSY SD +N+CW++ PEL I R+H
Sbjct: 76 DRIINLKFGDPTVYERYWQENGEVTTMVIPGWQSLSYFSDENNLCWFLEPELAKEIVRVH 135
Query: 230 HVVGNAVTQDKYIVIGTGSTQLFMAALFALSPSQTPDHPINVVSAAPHYSEYKPEIDVLR 409
VVGNAVTQD++IV+GTGSTQL+ AAL+ALSP PINVVSA P+YS Y D L+
Sbjct: 136 KVVGNAVTQDRFIVVGTGSTQLYQAALYALSP-HDDSGPINVVSATPYYSTYPLITDCLK 194
Query: 410 SAVVQWAGDAGVYDKNEPYIEVVNYPN 490
S + +W GDA Y ++ PYIE+V PN
Sbjct: 195 SGLYRWGGDAKTYKEDGPYIELVTSPN 221
>ref|NP_177213.1| putative alliinase; protein id: At1g70560.1 [Arabidopsis thaliana]
gi|25355338|pir||F96729 probable alliinase F5A18.26
[imported] - Arabidopsis thaliana
gi|12324766|gb|AAG52348.1|AC011663_27 putative
alliinase; 99695-97270 [Arabidopsis thaliana]
gi|12325049|gb|AAG52476.1|AC010796_15 putative
alliinase; 54807-57232 [Arabidopsis thaliana]
gi|26449516|dbj|BAC41884.1| putative alliinase
[Arabidopsis thaliana] gi|28950959|gb|AAO63403.1|
At1g70560 [Arabidopsis thaliana]
Length = 391
Score = 164 bits (414), Expect = 6e-40
Identities = 77/151 (50%), Positives = 105/151 (68%)
Frame = +2
Query: 38 VTCSDSTINLEKGDPLVFGKYWKKKSDECSVVIQGWEFLSYLSDTSNVCWYMLPELKGAI 217
+ SD +NL+ GDP + +YW+K D C+V I+G + +SY SD +N+CW++ PEL+ AI
Sbjct: 18 IPMSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAI 77
Query: 218 QRLHHVVGNAVTQDKYIVIGTGSTQLFMAALFALSPSQTPDHPINVVSAAPHYSEYKPEI 397
+ LH VVGNA T+D+YIV+GTGSTQL AA+ ALS S P++VV+AAP YS Y E
Sbjct: 78 KDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALS-SLARSQPVSVVAAAPFYSTYVEET 136
Query: 398 DVLRSAVVQWAGDAGVYDKNEPYIEVVNYPN 490
+RS + +W GDA +DK PYIE+V PN
Sbjct: 137 TYVRSGMYKWEGDAWGFDKKGPYIELVTSPN 167
>pir||T05567 alliin lyase homolog F22K18.130 - Arabidopsis thaliana
gi|4220523|emb|CAA22996.1| putative alliin lyase
[Arabidopsis thaliana] gi|7269317|emb|CAB79377.1|
putative alliin lyase [Arabidopsis thaliana]
Length = 454
Score = 162 bits (409), Expect = 2e-39
Identities = 77/144 (53%), Positives = 103/144 (71%)
Frame = +2
Query: 59 INLEKGDPLVFGKYWKKKSDECSVVIQGWEFLSYLSDTSNVCWYMLPELKGAIQRLHHVV 238
I+L GDP V+ +YW++ + ++VI GW+ LSY SD +N+CW++ PEL I R+H VV
Sbjct: 93 ISLCSGDPTVYERYWQENGEVTTMVIPGWQSLSYFSDENNLCWFLEPELAKEIVRVHKVV 152
Query: 239 GNAVTQDKYIVIGTGSTQLFMAALFALSPSQTPDHPINVVSAAPHYSEYKPEIDVLRSAV 418
GNAVTQD++IV+GTGSTQL+ AAL+ALSP PINVVSA P+YS Y D L+S +
Sbjct: 153 GNAVTQDRFIVVGTGSTQLYQAALYALSP-HDDSGPINVVSATPYYSTYPLITDCLKSGL 211
Query: 419 VQWAGDAGVYDKNEPYIEVVNYPN 490
+W GDA Y ++ PYIE+V PN
Sbjct: 212 YRWGGDAKTYKEDGPYIELVTSPN 235
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 485,379,732
Number of Sequences: 1393205
Number of extensions: 11126010
Number of successful extensions: 39253
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 37050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39062
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
