Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003929A_C01 KMC003929A_c01
(632 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2... 358 4e-98
gb|AAA34017.1| protein kinase 2 357 9e-98
pir||T03692 probable serine/threonine-specific protein kinase (E... 353 1e-96
gb|AAG60195.1|AC084763_15 protein kinase REK [Oryza sativa] 353 1e-96
pir||T03403 probable serine/threonine-specific protein kinase (E... 352 3e-96
>pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2.7.1.-) -
soybean gi|169991|gb|AAA33979.1| protein kinase
Length = 339
Score = 358 bits (918), Expect = 4e-98
Identities = 171/189 (90%), Positives = 183/189 (96%)
Frame = +3
Query: 66 MEERYEPLKELGSGNFGVARLARDKNTGELVAVKYIERGKKIDENVQREIINHRSLRHPN 245
MEERYE LKELGSGNFGVARLA+DK TGELVA+KYIERGKKID NVQREI+NHRSLRHPN
Sbjct: 1 MEERYETLKELGSGNFGVARLAKDKETGELVAIKYIERGKKIDANVQREIVNHRSLRHPN 60
Query: 246 IIRFKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEI 425
IIRFKEV LTPTHLAIVLEYA+GGELFERIC+AGR SEDEAR+FFQQLISGVSYCHSM+I
Sbjct: 61 IIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQI 120
Query: 426 CHRDLKLENTLLDGNPSPRLKICEFGYSKSAILHSQPKSRVGTPAYIAPEVLSRKEYDGK 605
CHRDLKLENTLLDGNP+PRLKIC+FG+SKSA+LHSQPKS VGTPAYIAPEVLSRKEYDGK
Sbjct: 121 CHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGK 180
Query: 606 VADVWACGV 632
VADVW+CGV
Sbjct: 181 VADVWSCGV 189
>gb|AAA34017.1| protein kinase 2
Length = 339
Score = 357 bits (915), Expect = 9e-98
Identities = 170/189 (89%), Positives = 183/189 (95%)
Frame = +3
Query: 66 MEERYEPLKELGSGNFGVARLARDKNTGELVAVKYIERGKKIDENVQREIINHRSLRHPN 245
M+ERYE LKELGSGNFGVARLA+DK TGELVA+KYIERGKKID NVQREI+NHRSLRHPN
Sbjct: 1 MDERYETLKELGSGNFGVARLAKDKETGELVAIKYIERGKKIDANVQREIVNHRSLRHPN 60
Query: 246 IIRFKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEI 425
IIRFKEV LTPTHLAIVLEYA+GGELFERIC+AGR SEDEAR+FFQQLISGVSYCHSM+I
Sbjct: 61 IIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQI 120
Query: 426 CHRDLKLENTLLDGNPSPRLKICEFGYSKSAILHSQPKSRVGTPAYIAPEVLSRKEYDGK 605
CHRDLKLENTLLDGNP+PRLKIC+FG+SKSA+LHSQPKS VGTPAYIAPEVLSRKEYDGK
Sbjct: 121 CHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGK 180
Query: 606 VADVWACGV 632
VADVW+CGV
Sbjct: 181 VADVWSCGV 189
>pir||T03692 probable serine/threonine-specific protein kinase (EC 2.7.1.-) -
rice gi|1669573|dbj|BAA13608.1| endosperm kinase [Oryza
sativa]
Length = 334
Score = 353 bits (905), Expect = 1e-96
Identities = 169/189 (89%), Positives = 183/189 (96%)
Frame = +3
Query: 66 MEERYEPLKELGSGNFGVARLARDKNTGELVAVKYIERGKKIDENVQREIINHRSLRHPN 245
MEERYE LKELG+GNFGVARL RDK + ELVAVKYIERGKKIDENVQREIINHRSLRHPN
Sbjct: 1 MEERYEALKELGAGNFGVARLVRDKRSKELVAVKYIERGKKIDENVQREIINHRSLRHPN 60
Query: 246 IIRFKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEI 425
IIRFKEV LTPTHLAIV+EYA+GGELFE+IC+AGRFSEDEARYFFQQLISGVSYCHS+EI
Sbjct: 61 IIRFKEVCLTPTHLAIVMEYAAGGELFEQICTAGRFSEDEARYFFQQLISGVSYCHSLEI 120
Query: 426 CHRDLKLENTLLDGNPSPRLKICEFGYSKSAILHSQPKSRVGTPAYIAPEVLSRKEYDGK 605
CHRDLKLENTLLDG+P+PR+KIC+FGYSKSA+LHS+PKS VGTPAYIAPEVLSRKEYDGK
Sbjct: 121 CHRDLKLENTLLDGSPTPRVKICDFGYSKSALLHSKPKSTVGTPAYIAPEVLSRKEYDGK 180
Query: 606 VADVWACGV 632
VADVW+CGV
Sbjct: 181 VADVWSCGV 189
>gb|AAG60195.1|AC084763_15 protein kinase REK [Oryza sativa]
Length = 334
Score = 353 bits (905), Expect = 1e-96
Identities = 169/189 (89%), Positives = 183/189 (96%)
Frame = +3
Query: 66 MEERYEPLKELGSGNFGVARLARDKNTGELVAVKYIERGKKIDENVQREIINHRSLRHPN 245
MEERYE LKELG+GNFGVARL RDK + ELVAVKYIERGKKIDENVQREIINHRSLRHPN
Sbjct: 1 MEERYEALKELGAGNFGVARLVRDKRSKELVAVKYIERGKKIDENVQREIINHRSLRHPN 60
Query: 246 IIRFKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEI 425
IIRFKEV LTPTHLAIV+EYA+GGELFE+IC+AGRFSEDEARYFFQQLISGVSYCHS+EI
Sbjct: 61 IIRFKEVCLTPTHLAIVMEYAAGGELFEQICTAGRFSEDEARYFFQQLISGVSYCHSLEI 120
Query: 426 CHRDLKLENTLLDGNPSPRLKICEFGYSKSAILHSQPKSRVGTPAYIAPEVLSRKEYDGK 605
CHRDLKLENTLLDG+P+PR+KIC+FGYSKSA+LHS+PKS VGTPAYIAPEVLSRKEYDGK
Sbjct: 121 CHRDLKLENTLLDGSPTPRVKICDFGYSKSALLHSKPKSTVGTPAYIAPEVLSRKEYDGK 180
Query: 606 VADVWACGV 632
VADVW+CGV
Sbjct: 181 VADVWSCGV 189
>pir||T03403 probable serine/threonine-specific protein kinase (EC 2.7.1.-) -
rice gi|1944000|dbj|BAA19573.1| protein kinase [Oryza
sativa (indica cultivar-group)]
Length = 334
Score = 352 bits (902), Expect = 3e-96
Identities = 168/189 (88%), Positives = 183/189 (95%)
Frame = +3
Query: 66 MEERYEPLKELGSGNFGVARLARDKNTGELVAVKYIERGKKIDENVQREIINHRSLRHPN 245
MEERYE LKELG+GNFGVARL RDK + ELVAVKYIERGKKIDENVQREIINHRSLRHPN
Sbjct: 1 MEERYEALKELGAGNFGVARLVRDKRSKELVAVKYIERGKKIDENVQREIINHRSLRHPN 60
Query: 246 IIRFKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEI 425
IIRFKEV LTPTHLAIV+EYA+GGELFE+IC+AGRFSED+ARYFFQQLISGVSYCHS+EI
Sbjct: 61 IIRFKEVCLTPTHLAIVMEYAAGGELFEQICTAGRFSEDDARYFFQQLISGVSYCHSLEI 120
Query: 426 CHRDLKLENTLLDGNPSPRLKICEFGYSKSAILHSQPKSRVGTPAYIAPEVLSRKEYDGK 605
CHRDLKLENTLLDG+P+PR+KIC+FGYSKSA+LHS+PKS VGTPAYIAPEVLSRKEYDGK
Sbjct: 121 CHRDLKLENTLLDGSPTPRVKICDFGYSKSALLHSKPKSTVGTPAYIAPEVLSRKEYDGK 180
Query: 606 VADVWACGV 632
VADVW+CGV
Sbjct: 181 VADVWSCGV 189
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 567,226,748
Number of Sequences: 1393205
Number of extensions: 12368247
Number of successful extensions: 52622
Number of sequences better than 10.0: 10202
Number of HSP's better than 10.0 without gapping: 38742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40809
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
