Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003913A_C01 KMC003913A_c01
(410 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA47926.1| 3-ketoacyl-CoA thiolase; acetyl-CoA acyltransfer... 194 2e-49
pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor... 192 1e-48
pir||S57792 acetyl-CoA C-acyltransferase (EC 2.3.1.16) B precurs... 187 3e-47
emb|CAA53078.1| 3-ketoacyl-CoA thiolase B; acetyl-CoA C-acyltran... 187 3e-47
pir||S33637 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor... 186 6e-47
>emb|CAA47926.1| 3-ketoacyl-CoA thiolase; acetyl-CoA acyltransferase [Cucumis
sativus]
Length = 462
Score = 194 bits (493), Expect = 2e-49
Identities = 101/132 (76%), Positives = 113/132 (85%)
Frame = +2
Query: 14 MEKAINRQNVLLQHLNPSSVSIYSTNPDSSSPTSLYASACAAGDSAAYLRPSGFGDDVVI 193
MEKAINRQ++LL HL PSS S Y+ +SL AS CAAGDSA+Y R S FGDDVVI
Sbjct: 1 MEKAINRQSILLHHLRPSS-SAYTNE------SSLSASVCAAGDSASYQRTSVFGDDVVI 53
Query: 194 VAAYRTALCKAKRGGFKDTHADDLLAPVLKAVVEKTNVNPSEVGDIIVGSVLAPVSQRAS 373
VAAYRTA+CK+KRGGFKDT+ DDLLAPVLKA++EKTN+NPSEVGDI+VGSVLAP SQRAS
Sbjct: 54 VAAYRTAICKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRAS 113
Query: 374 ECRMAAFYAGFP 409
ECRMAAFYAGFP
Sbjct: 114 ECRMAAFYAGFP 125
>pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit
gi|1694621|dbj|BAA11117.1| 3-ketoacyl-CoA thiolase
[Cucurbita cv. Kurokawa Amakuri]
Length = 461
Score = 192 bits (487), Expect = 1e-48
Identities = 101/132 (76%), Positives = 111/132 (83%)
Frame = +2
Query: 14 MEKAINRQNVLLQHLNPSSVSIYSTNPDSSSPTSLYASACAAGDSAAYLRPSGFGDDVVI 193
MEKAINRQ++LL HL PSS S YS +SL AS CAAGDSA+Y R S FGDDVVI
Sbjct: 1 MEKAINRQSILLHHLRPSS-SAYSHE------SSLSASVCAAGDSASYQRTSVFGDDVVI 53
Query: 194 VAAYRTALCKAKRGGFKDTHADDLLAPVLKAVVEKTNVNPSEVGDIIVGSVLAPVSQRAS 373
VAAYRTALCK+KRGGFKDT+ DDLLAPVLKA++EKTN+NPSEVGDI+VGSVLAP SQRAS
Sbjct: 54 VAAYRTALCKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRAS 113
Query: 374 ECRMAAFYAGFP 409
ECRMA FY GFP
Sbjct: 114 ECRMATFYPGFP 125
>pir||S57792 acetyl-CoA C-acyltransferase (EC 2.3.1.16) B precursor, peroxisomal
- mango (fragment)
Length = 430
Score = 187 bits (474), Expect = 3e-47
Identities = 97/132 (73%), Positives = 112/132 (84%)
Frame = +2
Query: 14 MEKAINRQNVLLQHLNPSSVSIYSTNPDSSSPTSLYASACAAGDSAAYLRPSGFGDDVVI 193
MEKAINRQ VLLQHL PS+ S ++ ++L AS CAAGDSAAY R S +GDDVVI
Sbjct: 1 MEKAINRQQVLLQHLRPSNSSSHNYE------SALAASVCAAGDSAAYHRASVYGDDVVI 54
Query: 194 VAAYRTALCKAKRGGFKDTHADDLLAPVLKAVVEKTNVNPSEVGDIIVGSVLAPVSQRAS 373
VAA+RTALCK+KRGGFKDT+ DDLLAPVLKA++EKTN++PSEVGDI+VG+VLA SQRAS
Sbjct: 55 VAAHRTALCKSKRGGFKDTYPDDLLAPVLKALIEKTNLDPSEVGDIVVGTVLAAGSQRAS 114
Query: 374 ECRMAAFYAGFP 409
ECRMAAFYAGFP
Sbjct: 115 ECRMAAFYAGFP 126
>emb|CAA53078.1| 3-ketoacyl-CoA thiolase B; acetyl-CoA C-acyltransferase [Mangifera
indica]
Length = 430
Score = 187 bits (474), Expect = 3e-47
Identities = 97/132 (73%), Positives = 112/132 (84%)
Frame = +2
Query: 14 MEKAINRQNVLLQHLNPSSVSIYSTNPDSSSPTSLYASACAAGDSAAYLRPSGFGDDVVI 193
MEKAINRQ VLLQHL PS+ S ++ ++L AS CAAGDSAAY R S +GDDVVI
Sbjct: 1 MEKAINRQQVLLQHLRPSNSSSHNYE------SALAASVCAAGDSAAYHRASVYGDDVVI 54
Query: 194 VAAYRTALCKAKRGGFKDTHADDLLAPVLKAVVEKTNVNPSEVGDIIVGSVLAPVSQRAS 373
VAA+RTALCK+KRGGFKDT+ DDLLAPVLKA++EKTN++PSEVGDI+VG+VLA SQRAS
Sbjct: 55 VAAHRTALCKSKRGGFKDTYPDDLLAPVLKALIEKTNLDPSEVGDIVVGTVLAAGSQRAS 114
Query: 374 ECRMAAFYAGFP 409
ECRMAAFYAGFP
Sbjct: 115 ECRMAAFYAGFP 126
>pir||S33637 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucumber
Length = 459
Score = 186 bits (472), Expect = 6e-47
Identities = 99/132 (75%), Positives = 111/132 (84%)
Frame = +2
Query: 14 MEKAINRQNVLLQHLNPSSVSIYSTNPDSSSPTSLYASACAAGDSAAYLRPSGFGDDVVI 193
MEKAINRQ++LL HL PSS S Y+ +SL AS CAAGDSA+Y R S FGDD I
Sbjct: 1 MEKAINRQSILLHHLRPSS-SAYTNE------SSLSASVCAAGDSASYQRTSVFGDD--I 51
Query: 194 VAAYRTALCKAKRGGFKDTHADDLLAPVLKAVVEKTNVNPSEVGDIIVGSVLAPVSQRAS 373
VAAYRTA+CK+KRGGFKDT+ DDLLAPVLKA++EKTN+NPSEVGDI+VGSVLAP SQRAS
Sbjct: 52 VAAYRTAICKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRAS 111
Query: 374 ECRMAAFYAGFP 409
ECRMAAFYAGFP
Sbjct: 112 ECRMAAFYAGFP 123
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 363,997,827
Number of Sequences: 1393205
Number of extensions: 7661986
Number of successful extensions: 27638
Number of sequences better than 10.0: 328
Number of HSP's better than 10.0 without gapping: 26298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27537
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 7023606888
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
